Protein Alignment Scr and Hoxc8

DIOPT Version :9

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_034596.1
• Gene: Hoxc8 / 15426
• MGIID: 96198
• Length: 242
• Species: Mus musculus
• Alignment Length: 214
• Identity: 79/214 - (36%)
• Similarity: 102/214 - (47%)
• Gaps: 53/214 - (24%)

  Fly   176 PGGSGGGGVSGSN------NNNNSANSNNNNSQSLASPQDLSTRDISPKLSPSSVVESVARSLNK 234
            ||||..|....|:      ::..|..||:...|   :|..||....:.|...   .|::.|.
Mouse    42 PGGSAPGFQHASHHVQDFFHHGTSGISNSGYQQ---NPCSLSCHGDASKFYG---YEALPRQ--- 97

  Fly   235 GVLGGSLAAAAAAAGLNNNHSGSGVSGGPGNVNVPMHSPGGGDSDSESDSGNEAGSSQNSGNGKK 299
                 ||..|...|.:               |..|         |.:|.:...:...|...|...
Mouse    98 -----SLYGAQQEASV---------------VQYP---------DCKSSANTNSSEGQGHLNQNS 133

  Fly   300 NPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 364
            :|..::||| |.|       |.|. :..|.:|:|||||||||||.||.||||:||||::|||.||
Mouse   134 SPSLMFPWM-RPH-------APGR-RSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLT 189

  Fly   365 ERQIKIWFQNRRMKWKKEH 383
            |||:||||||||||||||:
Mouse   190 ERQVKIWFQNRRMKWKKEN 208

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeobox	328..381	CDD:395001	42/52 (81%)
Hoxc8	NP_034596.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	114..154		11/48 (23%)
		Antp-type hexapeptide	138..143		3/5 (60%)
		Homeobox	153..206	CDD:395001	42/52 (81%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	206..242		2/3 (67%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.810