Protein Alignment Scr and Hoxc4

DIOPT Version :9

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_038581.2
• Gene: Hoxc4 / 15423
• MGIID: 96195
• Length: 264
• Species: Mus musculus
• Alignment Length: 306
• Identity: 97/306 - (31%)
• Similarity: 129/306 - (42%)
• Gaps: 101/306 - (33%)

  Fly    88 PNTPQAHYANQAAYGGQGNPDMVDYTQLQPQRLLLQQQQQQQQQQHAHAAAAVAAQQQQQLAQQQ 152
            |..|.....:|.:|..:.:|:....|             ::...||.|          |:|....
Mouse    15 PKFPPCEEYSQNSYIPEHSPEYYGRT-------------RESGFQHHH----------QELYPPP 56

  Fly   153 HPQQQQQQQQANISCKYANDPVTPGGSGGGGVSGSNNNNNSANSNNNNSQSLASPQDLSTRDISP 217
            .|:....::|  .||.....|         |.|.::....:.:.:...||.|..|..||....||
Mouse    57 PPRPSYPERQ--YSCTSLQGP---------GNSRAHGPAQAGHHHPEKSQPLCEPAPLSGTSASP 110

  Fly   218 KLSPSSVVESVARSLNKGVLGGSLAAAAAAAGLNNNHSGSGVSGGPGNVNVPMHSPGGGDSDSES 282
            ..:|.:.                                                     |....
Mouse   111 SPAPPAC-----------------------------------------------------SQPAP 122

  Fly   283 DSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNAN---GETKRQRTSYTRYQTLELEKEFH 344
            |..:.|.|.|         |.:|||||::|:  ||||.|   ||.||.||:|||.|.||||||||
Mouse   123 DHPSSAASKQ---------PIVYPWMKKIHV--STVNPNYNGGEPKRSRTAYTRQQVLELEKEFH 176

  Fly   345 FNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMASMNI 390
            :||||||||||||||:|||:|||||||||||||||||:|::.:..:
Mouse   177 YNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLPNTKV 222

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeobox	328..381	CDD:395001	46/52 (88%)
Hoxc4	NP_038581.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	19..130		28/197 (14%)
		Antp-type hexapeptide	135..140		3/4 (75%)
		Homeobox	159..213	CDD:365835	46/53 (87%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	214..264		1/9 (11%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45771
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	6	5.910