DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Scr and Mnx1

DIOPT Version :9

Sequence 1:NP_001368995.1 Gene:Scr / 40833 FlyBaseID:FBgn0003339 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_064328.2 Gene:Mnx1 / 15285 MGIID:109160 Length:404 Species:Mus musculus


Alignment Length:568 Identity:132/568 - (23%)
Similarity:173/568 - (30%) Gaps:268/568 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VNSLASCYPQQMNPQQNHPGAGNSSAGG--SGGGAGGSGGVVPSGGTNGG-------QGSAGAAT 69
            :::|.:..|.:....|:.|.|..:|...  ||.|.|||||    |||:.|       ..|...|.
Mouse     9 IDALLAVDPPRAASTQSAPLALVTSLATTVSGPGRGGSGG----GGTSSGASRSCSPASSEATAA 69

  Fly    70 PGANDYFPAAAAYTPNLYPNTPQAHYA------------NQAAYGGQGNPDMVDYTQLQPQRLLL 122
            ||  |...|.:...|.|.    .||.|            ...|.||.|.|               
Mouse    70 PG--DRLRAESPSPPRLL----AAHCALLPKPGFLGAGGGGGAAGGPGTP--------------- 113

  Fly   123 QQQQQQQQQQHAH------AAAAVAAQQQQQLAQQQHPQQQQQQQQANISCKYANDPVTPGGSGG 181
                    ..|||      ||||.||.....||...||                     .|..||
Mouse   114 --------HHHAHPGAAAAAAAAAAAAAAGGLALGLHP---------------------GGAQGG 149

  Fly   182 GGVSGSNNNNNSANSNNNNSQSLASPQDLSTRDISPKLSPSSVVESVARSLNKGVLGG----SLA 242
            .|:..                                               :..|.|    |.:
Mouse   150 AGLPA-----------------------------------------------QAALYGHPVYSYS 167

  Fly   243 AAAAAAGLNNNH-----SGSGVSGG-PGNVNVPMHSPGGGDSDSESDSGNEAGSSQNSGNGKKNP 301
            ||||||.|...|     |...|.|. |.:...|:                :.|:|..        
Mouse   168 AAAAAAALAGQHPALSYSYPQVQGAHPAHPADPI----------------KLGASTF-------- 208

  Fly   302 PQIYPWMKRVHLG---------TSTVNAN--GETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRI 355
             |:..|::....|         :|...:|  |:.:|.||::|..|.||||.:|..|:||:|.:|.
Mouse   209 -QLDQWLRASTAGMILPKMPDFSSQAQSNLLGKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRF 272

  Fly   356 EIAHALCLTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMGPYGHPYHQFDIHPSQFAHLSAXDA 420
            |:|.:|.|||.|:||||||||||||:..|                                    
Mouse   273 EVATSLMLTETQVKIWFQNRRMKWKRSKK------------------------------------ 301

  Fly   421 WHFSGTGXRLNQLYQEPYQTAAAASAASGYQSQDGGPIGGGSVGVGGG--------AGGP--GSL 475
                                 |...||...:.|.|   |||..|.||.        .|.|  |..
Mouse   302 ---------------------AKEQAAQEAEKQKG---GGGGTGKGGSEEKTEEELMGPPVSGDK 342

  Fly   476 ANGG------------------------SNGSGPNSLFASAASSSQAP 499
            |:|.                        |||:|.::..:..:|...:|
Mouse   343 ASGRRLRDLRDSDPDEDEDDEEEDNFPYSNGAGAHAASSDCSSEDDSP 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScrNP_001368995.1 Homeobox 328..381 CDD:395001 32/52 (62%)
Mnx1NP_064328.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 36..80 18/49 (37%)
Homeobox 244..297 CDD:278475 31/52 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 299..404 23/152 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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