DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Scr and Gbx2

DIOPT Version :9

Sequence 1:NP_001368995.1 Gene:Scr / 40833 FlyBaseID:FBgn0003339 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_034392.1 Gene:Gbx2 / 14472 MGIID:95668 Length:348 Species:Mus musculus


Alignment Length:386 Identity:102/386 - (26%)
Similarity:144/386 - (37%) Gaps:114/386 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 GSAGAATPGANDY--FPAAAAYTPNLYPNTPQAHYANQAAYGGQGNPDMVDYTQLQPQRLLLQQQ 125
            ||....:||...|  :|....|.|.:.|..|..             |..:....|||   .|...
Mouse    29 GSPPQPSPGHFVYTGYPMFMPYRPVVLPPPPPP-------------PPALPQAALQP---ALPPA 77

  Fly   126 QQQQQ-------------QQHAHAAAAVAAQQQQQLAQQQHPQQQQQQQQANISCKYANDPVTPG 177
            ....|             |..|..:..:|.......|..||       |:|..:.|:|..|: ||
Mouse    78 HPHHQIPSLPTGFCSSLAQGMALTSTLMATLPGGFSASPQH-------QEAAAARKFAPQPL-PG 134

  Fly   178 GSGGGGVSGSNNNNNSANSNNNNSQSL-ASPQDLSTRDISPKLSPSSVVESVARSLNKGVLG--G 239
            |                 .|.:.:::| |..:|                       .|..|.  |
Mouse   135 G-----------------GNFDKAEALQADAED-----------------------GKAFLAKEG 159

  Fly   240 SLAAAAAAAGLNNNHSGSGVSGGPGNVNVPMHSPGG--------GDSDSESDS---GNEAGSSQN 293
            ||.|.:||..:..:..|: |.|...:.:.....|.|        .|.|..||.   |..|...::
Mouse   160 SLLAFSAAEAVQASLVGA-VRGQGKDESKVEDDPKGKEESFSLESDVDYSSDDNLPGQTAHKEED 223

  Fly   294 SGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIA 358
            .|:..:..||     .....|::|  :.|:.:|:||::|..|.||||||||..:||:...|.:||
Mouse   224 PGHALEETPQ-----SGGAAGSTT--STGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIA 281

  Fly   359 HALCLTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMGPYGHPYHQ------FDIHPSQFA 413
            |||.|:|.|:||||||||.|||:. |..:.|      ...|.|...      ..:|.|:||
Mouse   282 HALKLSEVQVKIWFQNRRAKWKRV-KAGNAN------SKTGEPSRNPKIVVPIPVHVSRFA 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScrNP_001368995.1 Homeobox 328..381 CDD:395001 33/52 (63%)
Gbx2NP_034392.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..81 6/37 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..139 12/52 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 179..251 16/78 (21%)
Homeobox 250..304 CDD:395001 33/53 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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