DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scr and Gbx2

DIOPT Version :10

Sequence 1:NP_001368995.1 Gene:Scr / 40833 FlyBaseID:FBgn0003339 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_034392.1 Gene:Gbx2 / 14472 MGIID:95668 Length:348 Species:Mus musculus


Alignment Length:386 Identity:102/386 - (26%)
Similarity:144/386 - (37%) Gaps:114/386 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 GSAGAATPGANDY--FPAAAAYTPNLYPNTPQAHYANQAAYGGQGNPDMVDYTQLQPQRLLLQQQ 125
            ||....:||...|  :|....|.|.:.|..|..             |..:....|||   .|...
Mouse    29 GSPPQPSPGHFVYTGYPMFMPYRPVVLPPPPPP-------------PPALPQAALQP---ALPPA 77

  Fly   126 QQQQQ-------------QQHAHAAAAVAAQQQQQLAQQQHPQQQQQQQQANISCKYANDPVTPG 177
            ....|             |..|..:..:|.......|..||       |:|..:.|:|..|: ||
Mouse    78 HPHHQIPSLPTGFCSSLAQGMALTSTLMATLPGGFSASPQH-------QEAAAARKFAPQPL-PG 134

  Fly   178 GSGGGGVSGSNNNNNSANSNNNNSQSL-ASPQDLSTRDISPKLSPSSVVESVARSLNKGVLG--G 239
            |                 .|.:.:::| |..:|                       .|..|.  |
Mouse   135 G-----------------GNFDKAEALQADAED-----------------------GKAFLAKEG 159

  Fly   240 SLAAAAAAAGLNNNHSGSGVSGGPGNVNVPMHSPGG--------GDSDSESDS---GNEAGSSQN 293
            ||.|.:||..:..:..|: |.|...:.:.....|.|        .|.|..||.   |..|...::
Mouse   160 SLLAFSAAEAVQASLVGA-VRGQGKDESKVEDDPKGKEESFSLESDVDYSSDDNLPGQTAHKEED 223

  Fly   294 SGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIA 358
            .|:..:..||     .....|::|  :.|:.:|:||::|..|.||||||||..:||:...|.:||
Mouse   224 PGHALEETPQ-----SGGAAGSTT--STGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIA 281

  Fly   359 HALCLTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMGPYGHPYHQ------FDIHPSQFA 413
            |||.|:|.|:||||||||.|||:. |..:.|      ...|.|...      ..:|.|:||
Mouse   282 HALKLSEVQVKIWFQNRRAKWKRV-KAGNAN------SKTGEPSRNPKIVVPIPVHVSRFA 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScrNP_001368995.1 Homeodomain 325..381 CDD:459649 34/55 (62%)
Gbx2NP_034392.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..81 6/37 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..139 12/52 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 179..251 16/78 (21%)
Homeodomain 248..304 CDD:459649 34/55 (62%)

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