DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scr and NKX2-6

DIOPT Version :10

Sequence 1:NP_001368995.1 Gene:Scr / 40833 FlyBaseID:FBgn0003339 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001129743.2 Gene:NKX2-6 / 137814 HGNCID:32940 Length:301 Species:Homo sapiens


Alignment Length:269 Identity:75/269 - (27%)
Similarity:102/269 - (37%) Gaps:55/269 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 GSLAAAAAAAGLNNNHSGSGVSGGPGNVNVPMH--------------SP-GGGDSDSESDSGNEA 288
            ||....|...|.:....||...|||....:.|.              || |||....|...||..
Human    52 GSEVHNAGGGGGDRKLDGSEPPGGPCEAVLEMDAERMGEPQPGLNAASPLGGGTRVPERGVGNSG 116

  Fly   289 GSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRR 353
            .|.:   .|:...|:.                 .:.::.|..:::.|.|.||:.|...|||:...
Human   117 DSVR---GGRSEQPKA-----------------RQRRKPRVLFSQAQVLALERRFKQQRYLSAPE 161

  Fly   354 RIEIAHALCLTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMGPYGHPYHQFDIHPSQFA-HLSA 417
            |..:|.||.||..|:||||||||.|.|::.:..|:.:.       |||     :.|.:.| .:..
Human   162 REHLASALQLTSTQVKIWFQNRRYKCKRQRQDKSLELA-------GHP-----LTPRRVAVPVLV 214

  Fly   418 XDAWHFSGTGXRLNQLYQEPYQTAAAASAASGYQSQDGGPIGGG-SVGVGGGAGGPG---SLANG 478
            .|.....|.|... ..:..||  :||.|..|.|....|.|.|.| .....|...||.   .||:.
Human   215 RDGKPCLGPGPGA-PAFPSPY--SAAVSPYSCYGGYSGAPYGAGYGTCYAGAPSGPAPHTPLASA 276

  Fly   479 GSNGSGPNS 487
            |....|.|:
Human   277 GFGHGGQNA 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScrNP_001368995.1 Homeodomain 325..381 CDD:459649 25/55 (45%)
NKX2-6NP_001129743.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..135 21/102 (21%)
Homeodomain 133..189 CDD:459649 25/55 (45%)

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