Protein Alignment Scr and LOC1272782

DIOPT Version :10

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: XP_311693.5
• Gene: LOC1272782 / 1272782
• VectorBaseID: AGAMI1_001207
• Length: 279
• Species: Anopheles gambiae
• Alignment Length: 347
• Identity: 71/347 - (20%)
• Similarity: 119/347 - (34%)
• Gaps: 143/347 - (41%)

  Fly   182 GGVSGSNNNNNSANSNNNNSQSLASPQDLSTRDISPKLSPSSVVESVARSLNKGVLGGSLAAAAA 246
            ||.....:.|:|::|:|::.:|:.|.:                        .:|
Mosquito    41 GGCRNCCSTNSSSSSSNSSPRSVHSEE------------------------GEG----------- 70

  Fly   247 AAGLNNNHSGSGVSGGPGNVNVPMHSPGGGDSDSESDSGNEAGSSQNSGNGKK------------ 299
                ::|.:|..:...||.           ::|.|.|...:.|.|.....|::
Mosquito    71 ----DDNDNGGRLRDEPGT-----------EADEELDEEIDVGQSVMQHPGQEAGFLPTAPSCGM 120

  Fly   300 -----------NPPQIYPWMKRVHLGTSTVNANGETKR-----QRTSYTRYQTLELEKEFHFNRY 348
                       :||::....|           .|..||     .|..:|..|...||..:..:.|
Mosquito   121 PTFDWLYYTRYHPPKLPRPQK-----------TGPVKRTPGRLPRVPFTPAQLSALEDAYKVSTY 174

  Fly   349 LTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMGPYGHPYHQFDIHPSQFA 413
            |:.....::|::|.||..::||||||||.:.::|.:.||:      |...|......:.||:
Mosquito   175 LSSEEANQLAYSLELTNTRVKIWFQNRRARDRREKREASL------MTGGGAATFTSESHPT--- 230

  Fly   414 HLSAXDAWHFSGTGXRLNQLYQEPYQTAAAASAASGYQSQDGGPIGGGSVGVGGGAGGPGSLANG 478
            |.:.            |..||      |...|||||.::
Mosquito   231 HCTL------------LPPLY------ATVGSAASGSRT-------------------------- 251

  Fly   479 GSNGSGPNSLFASAAS-SSQAP 499
            ||:.|.|:|:.|||.. .|::|
Mosquito   252 GSHPSSPSSVEASAGGRQSRSP 273

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	21/60 (35%)
LOC1272782	XP_311693.5	None