Protein Alignment Scr and Gbx2

DIOPT Version :9

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_446160.1
• Gene: Gbx2 / 114500
• RGDID: 621866
• Length: 348
• Species: Rattus norvegicus
• Alignment Length: 385
• Identity: 103/385 - (26%)
• Similarity: 144/385 - (37%)
• Gaps: 112/385 - (29%)

  Fly    63 GSAGAATPGANDY--FPAAAAYTPNLYPNTPQAHYANQAAYGGQGNPDMVDYTQLQPQRLLLQQQ 125
            ||....:||...|  :|....|.|.:.|..|..             |..:....|||   .|...
  Rat    29 GSPPQPSPGHFVYTGYPMFMPYRPVVLPPPPPP-------------PPALPQAALQP---ALPPA 77

  Fly   126 QQQQQ-------------QQHAHAAAAVAAQQQQQLAQQQHPQQQQQQQQANISCKYANDPVTPG 177
            ....|             |..|..:..:|.......|..||       |:|..:.|:|..|: ||
  Rat    78 HPHHQIPSLPTGFCSSLAQGMALTSTLMATLPGGFSASPQH-------QEAAAARKFAPQPL-PG 134

  Fly   178 GSGGGGVSGSNNNNNSANSNNNNSQSLASPQDLSTRDISPKLSPSSVVESVARSLNKGVLG--GS 240
            |                 .|.:.|::|.:    .|.|                  .|..|.  ||
  Rat   135 G-----------------GNFDKSEALQA----DTED------------------GKAFLAKEGS 160

  Fly   241 LAAAAAAAGLNNNHSGSGVSGGPGNVNVPMHSPGG--------GDSDSESDS---GNEAGSSQNS 294
            |.|.:||..:..:..|: |.|...:.:.....|.|        .|.|..||.   |..|...::.
  Rat   161 LLAFSAAEAVQASLVGA-VRGQGKDESKVEDDPKGKEESFSLESDVDYSSDDNLPGQTAHKEEDP 224

  Fly   295 GNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAH 359
            |:..:..||     .....|::|  :.|:.:|:||::|..|.||||||||..:||:...|.:|||
  Rat   225 GHALEETPQ-----SGGAAGSTT--STGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAH 282

  Fly   360 ALCLTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMGPYGHPYHQ------FDIHPSQFA 413
            ||.|:|.|:||||||||.|||:. |..:.|      ...|.|...      ..:|.|:||
  Rat   283 ALKLSEVQVKIWFQNRRAKWKRV-KAGNAN------SKTGEPSRNPKIVVPIPVHVSRFA 335

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeobox	328..381	CDD:395001	33/52 (63%)
Gbx2	NP_446160.1	Homeobox	250..304	CDD:395001	33/53 (62%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.810