DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Scr and hoxa7

DIOPT Version :9

Sequence 1:	NP_001368995.1	Gene:	Scr / 40833	FlyBaseID:	FBgn0003339	Length:	564	Species:	Drosophila melanogaster
Sequence 2:	NP_001363856.1	Gene:	hoxa7 / 101734257	XenbaseID:	XB-GENE-483655	Length:	207	Species:	Xenopus tropicalis

Alignment Length:	191	Identity:	84/191 - (43%)
Similarity:	100/191 - (52%)	Gaps:	44/191 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly   228 VARSLNKGVLGGSL----AAAAAAAGLNNNHSGSGVSGGPGNVNVP--MHSPGGGD--------S 278
            |:...:|...|.||    .:...:...|:...|.|...||...:||  .:||...:        |
Frog     7 VSALFSKYTAGASLFPNPESTPCSLASNSQRGGYGTGTGPFPSSVPSLYNSPLYQNPFPAYSLAS 71

  Fly   279 DS-----------------ESDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKR 326
            ||                 |.....||...|.:.:..:    |||||:         ::..:.||
Frog    72 DSYNLHCSSFDQNIPLLCNELPKAEEAALHQQADSHFR----IYPWMR---------SSGPDRKR 123

  Fly   327 QRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMAS 387
            .|.:||||||||||||||||||||||||||||||||||||||||||||||||||||||..|
Frog   124 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKEES 184

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeobox	328..381	CDD:395001	50/52 (96%)
hoxa7	NP_001363856.1	Homeobox	125..178	CDD:365835	50/52 (96%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.910