Protein Alignment Scr and hlx

DIOPT Version :10

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: XP_004914850.1
• Gene: hlx / 100488508
• XenbaseID: XB-GENE-483226
• Length: 397
• Species: Xenopus tropicalis
• Alignment Length: 369
• Identity: 82/369 - (22%)
• Similarity: 128/369 - (34%)
• Gaps: 119/369 - (32%)

  Fly    42 SGGGAGGSG------GVVPS--------GG---TNGGQGSAGAATPGA---NDYFPAAAAYTPNL 86
            ||.|:|.:|      |..||        ||   :..|..:..||:.|.   ..|.||.:.:.|.
 Frog    24 SGAGSGAAGFPALDTGKKPSFCIADILHGGDPESPPGSSALTAASVGVIHPAQYQPAGSPFRPT- 87

  Fly    87 YPNTPQAHYANQAAYGGQGNPDMVDYTQLQPQRLLLQQQQQQQQQQHAHAAAAVAAQQQQQLAQQ 151
             |.||::.:.::.:
 Frog    88 -PVTPESSFHHRLS--------------------------------------------------- 100

  Fly   152 QHPQQQQQQQQANISCKYANDPVTPGGSGGGGVSGSNNNNNSANSNNNNSQSLASPQDLS---TR 213
              |....|..:|...|                     .||:|....:.::|.....:||.   .|
 Frog   101 --PLPPYQPHRAVSLC---------------------TNNSSRARMHKSTQPAPCSKDLKFGIDR 142

  Fly   214 DISPKLSPSSVVESVARSLNKGVLGGSLAAAAAAAGLNNNHSGSGVSGGPGNVNVPMHSPGGGDS 278
            .:|.:..|.....:..|.|.      ||.:|...:||...|..|..    |:...|:...|...|
 Frog   143 ILSAEFDPKVKEGNTLRDLT------SLISAGQQSGLPGQHMQSTA----GHFFAPLEPLGEASS 197

  Fly   279 DSESDSGNEAGSSQN-----SGNGKKNPPQIYPWMKRVHLGTSTVNANGETKR--QRTSYTRYQT 336
            .....:|::..|.|.     .|:|.:   ::|.|.....|...|:....:.||  .|..::..|.
 Frog   198 LLGQLNGSQRSSVQQFQDTFPGDGSR---KLYMWGPYAVLTKDTMPQTYKRKRSWSRAVFSNLQR 259

  Fly   337 LELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 380
            ..|||.|...:|:|:..|.::|..|.||:.|:|:|||||||||:
 Frog   260 KGLEKRFEVQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWR 303

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	26/58 (45%)
hlx	XP_004914850.1	Homeodomain	244..304	CDD:459649	26/60 (43%)