Protein Alignment Scr and hoxc5

DIOPT Version :9

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: XP_002936695.2
• Gene: hoxc5 / 100487879
• XenbaseID: XB-GENE-485672
• Length: 225
• Species: Xenopus tropicalis
• Alignment Length: 211
• Identity: 86/211 - (40%)
• Similarity: 106/211 - (50%)
• Gaps: 51/211 - (24%)

  Fly   186 GSNN--------NNNSANSNNNNSQSLASPQDLSTRDISPKLSPSSVVESVARSLNKGVLGGSLA 242
            ||:|        :|.:|||...:...:.|             |..:|......:||.|:..
 Frog    53 GSSNSLSALDMPSNPNANSERPSCTVMGS-------------SGHTVGRGEQSALNSGIYN---- 100

  Fly   243 AAAAAAGLNNNHSG-SGVSGGPGNVNVPMHSPGGGDSDSESDSGNEAGSSQNSGNGKKNPPQIYP 306
            ..||...|.....| ..:...|.     ..:|.||....:.               ::.||||||
 Frog   101 QKAATTSLEERSKGIESIKTEPA-----QSTPQGGQPQQQQ---------------QQQPPQIYP 145

  Fly   307 WMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 371
            ||.::|:...|     :.||.|||||||||||||||||||||||||||||||:.|||.|||||||
 Frog   146 WMTKLHMSHET-----DGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIW 205

  Fly   372 FQNRRMKWKKEHKMAS 387
            ||||||||||:.|:.|
 Frog   206 FQNRRMKWKKDTKVKS 221

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeobox	328..381	CDD:395001	49/52 (94%)
hoxc5	XP_002936695.2	Homeobox	161..215	CDD:395001	49/53 (92%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	1	1.000	-	-		otm48005
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.910