Protein Alignment Scr and nkx1-2

DIOPT Version :10

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: XP_002937845.1
• Gene: nkx1-2 / 100486193
• XenbaseID: XB-GENE-854960
• Length: 246
• Species: Xenopus tropicalis
• Alignment Length: 117
• Identity: 39/117 - (33%)
• Similarity: 56/117 - (47%)
• Gaps: 25/117 - (21%)

  Fly   272 SPGGGDSDSESDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQT 336
            |||..:...|.:...|.          :|.|.:               .|.:.:|.||::|..|.
 Frog    73 SPGEPEELPEKEENQET----------QNVPSV---------------TNCKPRRARTAFTYEQL 112

  Fly   337 LELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMASM 388
            :.||..|..:|||:...|:.:|..|.|||.|:||||||||.||||:..:.|:
 Frog   113 VALESRFRSSRYLSVCERLSLALTLHLTETQVKIWFQNRRTKWKKQQPIGSL 164

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	28/55 (51%)
nkx1-2	XP_002937845.1	Homeodomain	101..157	CDD:459649	28/55 (51%)