Protein Alignment Scr and hoxa6

DIOPT Version :10

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: XP_002933441.2
• Gene: hoxa6 / 100485428
• XenbaseID: XB-GENE-481964
• Length: 237
• Species: Xenopus tropicalis
• Alignment Length: 148
• Identity: 73/148 - (49%)
• Similarity: 89/148 - (60%)
• Gaps: 13/148 - (8%)

  Fly   254 HSGSGVSGGPGNVNVPMHSPGG------GDSDSESDSGNEAGSSQNSGNGKKNPPQIYPWMKRVH 312
            :||...||.|.:.........|      .|......:..:..........:|....:||||:||:
 Frog    80 YSGKESSGSPSSYGTKHRGDSGEYLHFSADQQQYKSASAQGKMLHEEPTDRKYSSPVYPWMQRVN 144

  Fly   313 LGTSTV-NANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR 376
            ..|..| .|:|  :|.|.:|||:||||||||||||||||||||||||:|||||||||||||||||
 Frog   145 SCTGPVYGAHG--RRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRR 207

  Fly   377 MKWKKEHKMASMNIVPYH 394
            ||||||.|:    ::|.|
 Frog   208 MKWKKESKL----LLPSH 221

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	49/55 (89%)
hoxa6	XP_002933441.2	Homeodomain	156..212	CDD:459649	49/55 (89%)