Protein Alignment Scr and nkx3-1

DIOPT Version :10

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: XP_012814889.1
• Gene: nkx3-1 / 100038192
• XenbaseID: XB-GENE-479027
• Length: 211
• Species: Xenopus tropicalis
• Alignment Length: 182
• Identity: 49/182 - (26%)
• Similarity: 77/182 - (42%)
• Gaps: 36/182 - (19%)

  Fly   262 GPGNVNVPMHSPGGGDSDSESDS---GNEAGSSQNSGNGKKNPPQIY------------------ 305
            |||.....:.||   .:|.:.||   |.:...:.........|.:::
 Frog    29 GPGRKEKSLDSP---KTDQDQDSSLGGKKENCTPEKQQSSSQPAEMHHSQMEDENVELDQAQPIS 90

  Fly   306 PWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 370
            |..|::.|         :.||.|.:::..|.:|||::|...:||:...|.::|.:|.|||.|:||
 Frog    91 PVEKKLKL---------QQKRSRAAFSHSQVIELERKFSSQKYLSAPERAQLAKSLKLTETQVKI 146

  Fly   371 WFQNRRMKWKKEHKMASMNIVPYHMGPYGHPYHQFDIHPSQFAHLSAXDAWH 422
            ||||||.|.|::.....|..|....   .||....|...|:.:.||....:|
 Frog   147 WFQNRRYKTKRKQLATDMEEVEKSS---AHPVRSRDTDISRASLLSFYQNYH 195

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	26/55 (47%)
nkx3-1	XP_012814889.1	Homeodomain	101..157	CDD:459649	26/55 (47%)