Protein Alignment Scr and not

DIOPT Version :10

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_001164669.1
• Gene: not / 100038059
• XenbaseID: XB-GENE-478518
• Length: 236
• Species: Xenopus tropicalis
• Alignment Length: 137
• Identity: 43/137 - (31%)
• Similarity: 62/137 - (45%)
• Gaps: 33/137 - (24%)

  Fly   269 PMHSPGGGDSDSESDSGNEAG-SSQNSGNGKKNPPQIYPW------MKRVHLGTSTVNANGETKR 326
            ||..| .|:......:..|.| ...:..||..||   ..|      |||:
 Frog    96 PMRMP-RGECPCPDPACKERGLLYSHCPNGSMNP---LSWRTGPCKMKRI--------------- 141

  Fly   327 QRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH------KM 385
             ||.:|..|...|||||...:|:....|:::|..|.|||.|:|:||||||:||:|:.      |:
 Frog   142 -RTVFTPEQLERLEKEFLKQQYMVGTERVDLASTLNLTETQVKVWFQNRRIKWRKQSLEQKKAKL 205

  Fly   386 ASMNIVP 392
            :...::|
 Frog   206 SQFGVIP 212

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	26/55 (47%)
not	NP_001164669.1	Homeodomain	139..195	CDD:459649	28/71 (39%)