DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and HB53

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_201471.1 Gene:HB53 / 836803 AraportID:AT5G66700 Length:228 Species:Arabidopsis thaliana


Alignment Length:168 Identity:46/168 - (27%)
Similarity:71/168 - (42%) Gaps:24/168 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   363 GMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK---D 424
            ||..||:   .|..|:..||..|.....|...|:.:||..|.|..||:.:||||||.:||.   :
plant    68 GMLRKRK---LTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKNKKLE 129

  Fly   425 NKLPNTKNVRKKTVDANGNPTPVAKKPTKRAASKKQQQAQQQQQSQQQQTQQTPVMNECIRSDSL 489
            .:....||.....|...........|.|::.:     :||.:.:...::.::.|. |....|.|:
plant   130 EEYAKLKNHHDNVVLGQCQLESQILKLTEQLS-----EAQSEIRKLSERLEEMPT-NSSSSSLSV 188

  Fly   490 ESIGDVSSSLGNPPY-IPAAPETTSSYPGSQQHLSNNN 526
            |:        .|.|. ...||||..:.|   .::.:||
plant   189 EA--------NNAPTDFELAPETNYNIP---FYMLDNN 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 19/51 (37%)
HB53NP_201471.1 Homeobox 75..125 CDD:395001 20/49 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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