DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dfd and HB17

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_178252.2 Gene:HB17 / 814671 AraportID:AT2G01430 Length:275 Species:Arabidopsis thaliana


Alignment Length:147 Identity:40/147 - (27%)
Similarity:58/147 - (39%) Gaps:49/147 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 GSENDDMSEE------DRLMLD--RSPDELGSNDNDDDLGDSDSDEDLMAETTDGERIIYPWMKK 349
            |..:..:|:|      |:|.||  |.|   .|.|.||:                           
plant    92 GFSSSPLSDEGSGGGRDQLRLDMNRLP---SSEDGDDE--------------------------- 126

  Fly   350 IHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWF 414
                   ..|:..|..|.|::...||.|...||..|..|..|..:::..:|..|:|..|||::||
plant   127 -------EFSHDDGSAPPRKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWF 184

  Fly   415 QNRRMKWKKDNKLPNTK 431
            ||||.:    :||..|:
plant   185 QNRRAR----SKLKQTE 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 20/51 (39%)
HB17NP_178252.2 HOX 136..192 CDD:197696 22/59 (37%)
HALZ 194..237 CDD:128634 1/4 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.