Protein Alignment Dfd and Hoxa6

DIOPT Version :10

• Sequence 1: NP_477201.1
• Gene: Dfd / 40832
• FlyBaseID: FBgn0000439
• Length: 586
• Species: Drosophila melanogaster
• Sequence 2: NP_001178016.1
• Gene: Hoxa6 / 685732
• RGDID: 1590236
• Length: 233
• Species: Rattus norvegicus
• Alignment Length: 124
• Identity: 66/124 - (53%)
• Similarity: 84/124 - (67%)
• Gaps: 13/124 - (10%)

  Fly   310 SPDELGSNDNDDDLGDSDSDEDLMAETTDGERI--IYPWMKKIH-VAGVANGSYQPGMEPKRQRT 371
            ||::....|:....|.:     |..|.||.:..  :||||:::: .||...||:     .:|.|.
  Rat   106 SPEQQYKPDSSSVQGKA-----LHEEGTDRKYTSPVYPWMQRMNSCAGAVYGSH-----GRRGRQ 160

  Fly   372 AYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNT 430
            .|||:|.||||||||:|||||||||||||:.|.|:|||||||||||||||||:|||.|:
  Rat   161 TYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLINS 219

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dfd	NP_477201.1	Homeodomain	367..423	CDD:459649	44/55 (80%)
Hoxa6	NP_001178016.1	Homeodomain	156..212	CDD:459649	44/55 (80%)