DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dfd and En1

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_001056699.4 Gene:En1 / 685360 RGDID:1595088 Length:409 Species:Rattus norvegicus


Alignment Length:462 Identity:103/462 - (22%)
Similarity:143/462 - (30%) Gaps:164/462 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 NGHYSMTASTGHMSGAVGGGAGVG-SVGGGGAGGMTGH--PHSMHPADMVSDY------MAHHHN 95
            :|..::.|:...::.|..||..:. |.|..|:.|..|.  |.|..||......      :|||  
  Rat    14 SGLGAVAAAAAVVAAAAPGGLSLSLSPGASGSSGSDGDSVPVSPQPAPPSPPAAPCLPPLAHH-- 76

  Fly    96 PHSHSH--------------SHTHSLPHHHSNSAISGHH-------------------------- 120
            ||...|              .|. :.|.|....|...|.                          
  Rat    77 PHLPPHPPPPPPPPPPPPPPQHL-AAPAHQPQPAAQLHRTTNFFIDNILRPDFGCKKEQPLPQLL 140

  Fly   121 --QASAGGYSSNYANATPPSHPHSHPHAHPHQSLGYYVHHAPEFISAGAVHSDPTNGYGPA---- 179
              .|:|||.::...:........:.....|..|||.....|...:.|...:..|.:|..||    
  Rat   141 VASAAAGGGAAGGGSRVERDRSQTGAGRDPVHSLGTRASGAASLLCAPDANCGPPDGSQPATAVG 205

  Fly   180 ANVPNTSNGGGGGGSGAVLGGGAVGGSANGYY--GGYGGGYGTANGSVGSTHSQGHSPHSQMMDL 242
            |......|......:.|.....||..:|....  ...|||.|   ||.||..:||          
  Rat   206 AGASKAGNPAAAAAAAAAAAAAAVAAAAAAASKPSDSGGGSG---GSAGSPGAQG---------- 257

  Fly   243 PLQCSSTEPPTNTALGLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMGSENDDMSEEDRLML 307
                 :..|..|.|:.|                                |||.|.          
  Rat   258 -----AKFPEHNPAILL--------------------------------MGSANG---------- 275

  Fly   308 DRSPDELGSNDNDDDLGDSDSDEDLMAETTDGERIIYP-WMKKIHVAGVANGSYQPGMEP----- 366
              .|                     :.:|...:.:::| |:.      ....|.:|...|     
  Rat   276 --GP---------------------VVKTDSQQPLVWPAWVY------CTRYSDRPSSGPRTRKL 311

  Fly   367 ---------KRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWK 422
                     ||.|||:|..|:..|:.||..|||:|.:||..:|..|.|:|.||||||||:|.|.|
  Rat   312 KKKKNEKEDKRPRTAFTAEQLQRLKAEFQANRYITEQRRQTLAQELSLNESQIKIWFQNKRAKIK 376

  Fly   423 KDNKLPN 429
            |...:.|
  Rat   377 KATGIKN 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 28/51 (55%)
En1XP_001056699.4 Homeobox 323..377 CDD:395001 28/53 (53%)
Engrail_1_C_sig 378..408 CDD:402244 1/6 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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