DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and Nkx6-3

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001102925.1 Gene:Nkx6-3 / 685102 RGDID:1597780 Length:262 Species:Rattus norvegicus


Alignment Length:135 Identity:40/135 - (29%)
Similarity:62/135 - (45%) Gaps:23/135 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   326 SDSDEDLMAETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRY 390
            :|:.:|....|........|....||             :.|..|..:|.|||..|||.|...:|
  Rat   113 ADTGQDWRGSTRPCSNTPDPLSDTIH-------------KKKHTRPTFTGHQIFALEKTFEQTKY 164

  Fly   391 LTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRKKTVDANGNPTPVAKKPTKRA 455
            |....|..:|::|.::|.|:|:||||||.||:|.:.|..:.:..:....|:|:          ||
  Rat   165 LAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKSALEPSSSTPRAPGGASGD----------RA 219

  Fly   456 ASKKQ 460
            ||:.:
  Rat   220 ASENE 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 24/51 (47%)
Nkx6-3NP_001102925.1 Homeobox 143..197 CDD:395001 25/53 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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