DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dfd and Barhl2

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_075245.1 Gene:Barhl2 / 65050 RGDID:620726 Length:384 Species:Rattus norvegicus


Alignment Length:523 Identity:105/523 - (20%)
Similarity:163/523 - (31%) Gaps:200/523 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 MTASTGHMSGAVGGGAGVGSV----GGGGAGGMTGHPHSMHPADMVSDYMA-------------- 91
            |||    |.||.|...|:.::    |.|..|.|.|...|:..| ..:|:.:              
  Rat     1 MTA----MEGASGSSFGIDTILSGAGSGSPGMMNGDFRSLGEA-RTTDFRSQATPSPCSEIDTVG 60

  Fly    92 -----------HHHNPHSHSHSHTHSLPHHHSNSAISGHHQASAGGYSSNYANATPPSHPHSHPH 145
                       ....||..:....|   |||.      ||.......|:..|.:..|| |...|.
  Rat    61 TAPSSPISVTLEPPEPHLVTDGPQH---HHHL------HHGQQPPPPSAPPAQSLQPS-PQQQPP 115

  Fly   146 AHPHQSLGYYVHHAPEFISAGAVHSDPTNGYGPAANVPNTSNGGGGGGSGAVLGGGAVGGS---- 206
            ..|..:                     ....|.||..|.||       :.:.|....:|.|    
  Rat   116 PQPQSA---------------------AQQLGSAAAAPRTS-------TSSFLIKDILGDSKPLA 152

  Fly   207 ANGYYGGYGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQCSSTEPPTNTALGLQELGLKLEKRIE 271
            |...|          :.||.|.|   |:|..       :|::........|..::...||:||  
  Rat   153 ACAPY----------STSVSSPH---HTPKQ-------ECNAAHESFRPKLEQEDSKTKLDKR-- 195

  Fly   272 EAVPAGQQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSDSDEDLMAET 336
                                                                  .||..|:....
  Rat   196 ------------------------------------------------------EDSQSDIKCHG 206

  Fly   337 T--DGERIIYPWMKKIHVAGVANGSYQP--GMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRI 397
            |  :|:|.|           .::....|  ..:|::.|||::.||:.:||:.|...:||:.:.|:
  Rat   207 TKEEGDREI-----------TSSRESPPVRAKKPRKARTAFSDHQLNQLERSFERQKYLSVQDRM 260

  Fly   398 EIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRKKTVDANGN--------PTPVAKKP--- 451
            ::|..|.|::.|:|.|:||||.|||:...      |..:.:...||        |:|....|   
  Rat   261 DLAAALNLTDTQVKTWYQNRRTKWKRQTA------VGLELLAEAGNYSALQRMFPSPYFYHPSLL 319

  Fly   452 ------TKRAASKKQQQAQQQQQSQQQQTQQTPVMNECIRSDSLESIG----DVSSSLGNPPYIP 506
                  |..||:.....:..:.........|.|::...:    :..:|    ...:.|.||  ||
  Rat   320 GSMDSTTAAAAAAAMYSSMYRTPPAPHPQLQRPLVPRVL----IHGLGPGGQPALNPLSNP--IP 378

  Fly   507 AAP 509
            ..|
  Rat   379 GTP 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 22/51 (43%)
Barhl2NP_075245.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..134 35/168 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 154..237 25/169 (15%)
Homeobox 233..285 CDD:278475 22/51 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 364..384 6/20 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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