DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and hoxb5b

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_571612.2 Gene:hoxb5b / 58052 ZFINID:ZDB-GENE-000823-6 Length:276 Species:Danio rerio


Alignment Length:329 Identity:106/329 - (32%)
Similarity:142/329 - (43%) Gaps:97/329 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 SSNYANATPPSHPHSHPHAHPHQSLGYYVHHAPEFISAGAVHSDPTNGYGPAANVPNTSNGGGGG 192
            ||.:.|    |....:|:...:|.|.|                 .|||...|:...:||...|..
Zfish     2 SSYFLN----SFSGRYPNGSDYQLLNY-----------------GTNGAMNASYRDSTSMHSGSF 45

  Fly   193 G---SGAVLGGGAVGGSANGYYGGYGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQCSSTE---- 250
            |   :|..|   :|....||::|..|............|..:..|......| ||.|::::    
Zfish    46 GYNYNGIDL---SVNRPNNGHFGAVGDNSRAFQNPSQETRYRQSSCSLSSPD-PLSCATSDTLEL 106

  Fly   251 ----PPTNTALGLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSP 311
                ||:                 :::.|.|                  |..::..:.|   .|.
Zfish   107 KGSSPPS-----------------DQSTPTG------------------NSRLTNSNNL---TSS 133

  Fly   312 DELGSNDNDDDLGDSDSDEDLMAETT-----------------DGER-IIYPWMKKIHVAGVANG 358
            :.....|.|:....|:::|.....||                 ||:. .|:|||:|:|::     
Zfish   134 NSTHFADTDETNVSSETEEGAQTTTTSRTQKQESVATSTTTPNDGQTPQIFPWMRKLHIS----- 193

  Fly   359 SYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 423
            ....|.:.||.||||||:|.||||||||:||||||||||||||.|.|||||||||||||||||||
Zfish   194 HDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 258

  Fly   424 DNKL 427
            ||||
Zfish   259 DNKL 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 46/51 (90%)
hoxb5bNP_571612.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..182 23/157 (15%)
Antp-type hexapeptide 183..188 3/4 (75%)
Homeobox 205..257 CDD:278475 46/51 (90%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

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