DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and hoxa9a

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_571607.2 Gene:hoxa9a / 58047 ZFINID:ZDB-GENE-000823-1 Length:250 Species:Danio rerio


Alignment Length:241 Identity:74/241 - (30%)
Similarity:99/241 - (41%) Gaps:86/241 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 YGTAN-GSVGSTHSQG----HSPHSQ-----------MMDLPLQCSSTEPPT---NTALGLQELG 263
            |||:: |.:.:..|.|    :.||:|           ::|.......|||||   |.|.      
Zfish    58 YGTSDWGHIPTHFSTGVPSVYQPHAQPPVVGDYVQSWLLDSACGLPQTEPPTVNHNHAK------ 116

  Fly   264 LKLEKRIEEAVPAGQQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSDS 328
                                      .|....|||.:|       .||..:...:...:.|.|..
Zfish   117 --------------------------SDTNETNDDGTE-------YSPHTILQPEVFTNGGCSTK 148

  Fly   329 DEDLMAETTDGERIIYPWMKKIHVAGVANGSYQPGMEP-------------KRQRTAYTRHQILE 380
            .|...:.|.:         |...:.|      :||.:|             :::|..||:|||||
Zfish   149 TEAESSRTAE---------KSGDIEG------KPGADPENPVSNWLHASSTRKKRCPYTKHQILE 198

  Fly   381 LEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 426
            |||||.:|.||||.||.|:|..|.|:|||:||||||||||.||.||
Zfish   199 LEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNK 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 37/51 (73%)
hoxa9aNP_571607.2 Hox9_act 1..171 CDD:282473 32/166 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 105..177 23/125 (18%)
Homeobox 187..240 CDD:278475 37/52 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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