DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dfd and zfhx4

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_005162803.1 Gene:zfhx4 / 556453 ZFINID:ZDB-GENE-070530-3 Length:3528 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475
zfhx4XP_005162803.1 C2H2 Zn finger 602..623 CDD:275368
C2H2 Zn finger 633..654 CDD:275368
C2H2 Zn finger 688..705 CDD:275368
C2H2 Zn finger 1361..1381 CDD:275371
C2H2 Zn finger 1389..1410 CDD:275371
C2H2 Zn finger 1505..1527 CDD:275368
C2H2 Zn finger 1557..1575 CDD:275368
HOX 2069..2128 CDD:197696
Homeobox 2168..2221 CDD:278475
COG5576 2465..2620 CDD:227863
Homeobox 2527..2579 CDD:278475
Homeobox 2836..2888 CDD:278475
Nuc_recep-AF1 2995..>3058 CDD:288658
LLC1 <3089..>3130 CDD:291606
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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