DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and phox2bb

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001014818.1 Gene:phox2bb / 544654 ZFINID:ZDB-GENE-050407-3 Length:284 Species:Danio rerio


Alignment Length:183 Identity:49/183 - (26%)
Similarity:78/183 - (42%) Gaps:44/183 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   363 GMEPKRQ----RTAYTRHQILELEKEF---HYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMK 420
            |:..||:    ||.:|..|:.|||:.|   ||....||.   |:|..:.|:|.::::||||||.|
Zfish    91 GLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE---ELALKIDLTEARVQVWFQNRRAK 152

  Fly   421 WKK--------------------DNKLPNTKNVRKKTVDANGNPTPVAKKPTKRAASKKQQQAQQ 465
            ::|                    |::..::|..:....|:.|.|.| ...||....      ...
Zfish   153 FRKQERAAAAAAAAAKNGTGKKSDSREEDSKEAKATDPDSTGGPGP-NPNPTSNCG------GPS 210

  Fly   466 QQQSQQQQTQQTPVMNECIRSDSLESIGDVSSSLGNPPYIPAAPETTSSYPGS 518
            ....|...|...||  |.::: |:..:|..:.:.|    ..:||.|.:|.|.|
Zfish   211 PTGGQVSATGNGPV--EQVKT-SVAGMGPTAPTQG----WASAPGTITSIPDS 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 23/54 (43%)
phox2bbNP_001014818.1 Homeobox 102..154 CDD:278475 23/54 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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