DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dfd and PAX6

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001355839.1 Gene:PAX6 / 5080 HGNCID:8620 Length:503 Species:Homo sapiens


Alignment Length:539 Identity:110/539 - (20%)
Similarity:179/539 - (33%) Gaps:188/539 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 NPHSHSHSHTHSLPHHHSNS-----AISGHHQASA-----GGYSSNYANATPPSHPH--SHPHAH 147
            ||.:.|.|. |:.....|::     |::|.::..|     ||.:..:...:|.|..|  :..|:.
Human    25 NPAAPSQSQ-HAEQGGRSSAAEIKRAVAGANRLPALSLTCGGRTCLWLKPSPGSDSHVCTGGHSG 88

  Fly   148 PHQSLGYYVHHAP----------EFISAGAVHSDPTNGYGPAANVPNTSNGGGGGGSGAVLGGGA 202
            .:|..|.:|:..|          |...:||...|       .:.:...||             |.
Human    89 VNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCD-------ISRILQVSN-------------GC 133

  Fly   203 VGGSANGYYGGYGGGYGTANGSVGSTHSQGHSPH-------SQMMDLPLQCSSTEPPTNTALGLQ 260
            |......||         ..||:......|..|.       |::.....:|     |:..|..::
Human   134 VSKILGRYY---------ETGSIRPRAIGGSKPRVATPEVVSKIAQYKREC-----PSIFAWEIR 184

  Fly   261 ELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMGSENDDMSEE---DRLML--------------- 307
            :..|.......:.:|:...:..:   ||  ::.||...|..:   |:|.:               
Human   185 DRLLSEGVCTNDNIPSVSSINRV---LR--NLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGWY 244

  Fly   308 -----------DRSPDELGSNDNDDDLGDS--DSDEDLMAETTDGERIIYPWMKKIHVAGVANGS 359
                       |....:.|..:|.:.:..:  ||||                         |...
Human   245 PGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDE-------------------------AQMR 284

  Fly   360 YQPGMEPKRQRTAYTRHQILELEKEF---HYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKW 421
            .|...:.:|.||::|:.||..|||||   ||.....|.|   :|..:.|.|.:|::||.|||.||
Human   285 LQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARER---LAAKIDLPEARIQVWFSNRRAKW 346

  Fly   422 KKDNKLPNTKNVRKKTVDANGNPTPVAKKPTKRAASKKQQQAQQQQQSQQQQTQQTPVMNECIRS 486
            :::.||.|.:.      .|:..|:.:   |...:.|....|...|        ..|||.:  ..|
Human   347 RREEKLRNQRR------QASNTPSHI---PISSSFSTSVYQPIPQ--------PTTPVSS--FTS 392

  Fly   487 DSLESIGDVSSSL----------------GNPPYIPAAPETTSSY-------------------- 515
            .|:  :|...::|                .|.|..|..|..||||                    
Human   393 GSM--LGRTDTALTNTYSALPPMPSFTMANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTP 455

  Fly   516 PGSQQHLSNNNNNGSGNNN 534
            |..|.|:::.....||..:
Human   456 PHMQTHMNSQPMGTSGTTS 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 24/54 (44%)
PAX6NP_001355839.1 PAX 85..209 CDD:128645 25/160 (16%)
Homeobox 295..348 CDD:395001 25/55 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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