Protein Alignment Dfd and Hoxb4

DIOPT Version :9

• Sequence 1: NP_477201.1
• Gene: Dfd / 40832
• FlyBaseID: FBgn0000439
• Length: 586
• Species: Drosophila melanogaster
• Sequence 2: NP_001094257.1
• Gene: Hoxb4 / 497988
• RGDID: 1560113
• Length: 250
• Species: Rattus norvegicus
• Alignment Length: 449
• Identity: 124/449 - (27%)
• Similarity: 151/449 - (33%)
• Gaps: 217/449 - (48%)

  Fly     1 MSSFLMGYPHAPHHVQSPMSMGNGLDPKFPPLADDYHHYNGHYSMTASTGHMSGAVGGGAGVGSV 65
            |||||:.              .|.:||||||..:        ||.
  Rat     3 MSSFLIN--------------SNYVDPKFPPCEE--------YSQ-------------------- 25

  Fly    66 GGGGAGGMTGHPHSMHPADMVSDYMAHHHNPHSHSHSHTHSLPHHHSNSAISGHHQASAGGYSS- 129
                                 |||:...|:|..::......          ||....:|.|..:
  Rat    26 ---------------------SDYLPSDHSPGYYAGGQRRE----------SGFQPEAAFGRRAP 59

  Fly   130 ----NYANATPPSHPHSHPHAHPHQSLGYYVHHAPEFISAGAVHSDPTNGYGPAANVPNTSNGGG 190
                .||....|..|...|...|                      .|..|..|.|.|.:|
  Rat    60 CTVQRYAACRDPGPPPPPPPPPP----------------------PPPPGLSPRAPVQST----- 97

  Fly   191 GGGSGAVLGGGAVGGSANGYYGGYGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQCSSTEPPTNT 255
               :||:|                                ......|:::      ||:.||.
  Rat    98 ---AGALL--------------------------------PEPGQRSEVV------SSSPPPP-- 119

  Fly   256 ALGLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDELGSNDND 320
                               |..|.                          .|..||
  Rat   120 -------------------PCAQN--------------------------PLHPSP--------- 130

  Fly   321 DDLGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEF 385
                         :.:...|.::||||:|:||:.| |.:|..| ||||.||||||.|:|||||||
  Rat   131 -------------SHSACKEPVVYPWMRKVHVSTV-NPNYAGG-EPKRSRTAYTRQQVLELEKEF 180

  Fly   386 HYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRKKTVDANGNP 444
            |||||||||||:||||.|.||||||||||||||||||||:||||||.....|..|.|.|
  Rat   181 HYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSGGTAGAAGGP 239

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dfd	NP_477201.1	Homeobox	370..422	CDD:278475	46/51 (90%)
Hoxb4	NP_001094257.1	Homeobox	164..218	CDD:395001	47/53 (89%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	112	1.000	Domainoid score	I6061
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	1	1.000	-	-		otm44629
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45771
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	8	7.910