DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and MSX2

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_002440.2 Gene:MSX2 / 4488 HGNCID:7392 Length:267 Species:Homo sapiens


Alignment Length:148 Identity:44/148 - (29%)
Similarity:71/148 - (47%) Gaps:36/148 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   326 SDSDEDLMAETTDGERIIYPWMKKIHVAGVANGSYQP---GMEP-----------KRQRTAYTRH 376
            |::.||..|           ||::       .|.|.|   .|.|           ::.||.:|..
Human   106 SENSEDGAA-----------WMQE-------PGRYSPPPRHMSPTTCTLRKHKTNRKPRTPFTTS 152

  Fly   377 QILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK--DNKLPNTKNVRKKTVD 439
            |:|.||::|...:||:...|.|.:.:|.|:|.|:||||||||.|.|:  :.:|...|...|..:.
Human   153 QLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLP 217

  Fly   440 ANGN-PTPVAKKPTKRAA 456
            ::.: |.|:: .|.:.|:
Human   218 SSFSLPFPIS-SPLQAAS 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 25/51 (49%)
MSX2NP_002440.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..71
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..147 6/37 (16%)
Homeobox 145..199 CDD:365835 25/53 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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