DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and emx1

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001005459.1 Gene:emx1 / 448058 XenbaseID:XB-GENE-920144 Length:233 Species:Xenopus tropicalis


Alignment Length:130 Identity:41/130 - (31%)
Similarity:62/130 - (47%) Gaps:28/130 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 YPWMKKIHVAG-------------VANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRR 395
            |||:.:....|             :.:|.:  ..:|||.|||::..|:|.||:.|..|.|:....
 Frog   102 YPWVLRNRFFGHRFQGGDVSQESLLLHGPF--ARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAE 164

  Fly   396 RIEIAHTLVLSERQIKIWFQNRRMKWKK----------DNKLPNTKNV---RKKTVDANGNPTPV 447
            |.::|.:|.|||.|:|:||||||.|:|:          |.|...:.::   |..|...||....|
 Frog   165 RKQLASSLSLSETQVKVWFQNRRTKYKRQKLEEEGPDSDQKKKGSHHINRWRLATKQPNGEDIDV 229

  Fly   448  447
             Frog   230  229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 25/51 (49%)
emx1NP_001005459.1 COG5576 85..>194 CDD:227863 34/93 (37%)
Homeobox 139..192 CDD:365835 25/52 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 192..233 7/38 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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