DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dfd and ey

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster


Alignment Length:758 Identity:152/758 - (20%)
Similarity:243/758 - (32%) Gaps:267/758 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PHAPHHVQSPMSMGNGLDPKFPPLADDYHHYNGHYSMTASTGHMSGAVGGGAGVGSVGGGGAGGM 73
            |.|...|..|.|.|. |..:.|.|.|..|..|    :.|..........||:|:|.:.|..:..|
  Fly     8 PTAIGTVVPPWSAGT-LIERLPSLEDMAHKDN----VIAMRNLPCLGTAGGSGLGGIAGKPSPTM 67

  Fly    74 -------TGHPHSMHPADMVSDYMA--HHHNPHSHSHSHTHS----------LPHH--------- 110
                   ..||||      .|.|.|  ::|......||..:.          ||..         
  Fly    68 EAVEASTASHPHS------TSSYFATTYYHLTDDECHSGVNQLGGVFVGGRPLPDSTRQKIVELA 126

  Fly   111 HSNSA---ISGHHQASAG------GYSSNYANATPPSHPHSHPH---AHPHQSLGYYVHHAP--- 160
            ||.:.   ||...|.|.|      |......:..|.:...|.|.   |.....:..|....|   
  Fly   127 HSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIF 191

  Fly   161 ------EFISAGAVHSDPTNGYGPAANVPNTSN---------------GGGGGGSGAVLG----- 199
                  ..:......:|         |:|:.|:               ..|.|.|....|     
  Fly   192 AWEIRDRLLQENVCTND---------NIPSVSSINRVLRNLAAQKEQQSTGSGSSSTSAGNSISA 247

  Fly   200 ------GGAVGGSANGYYGGY------------------GGGYGTANGS-----------VGSTH 229
                  ||.|...|:|..|..                  ||...:..||           :.:.|
  Fly   248 KVSVSIGGNVSNVASGSRGTLSSSTDLMQTATPLNSSESGGASNSGEGSEQEAIYEKLRLLNTQH 312

  Fly   230 SQGHSP------------------------------------HSQMMDLPLQCSSTEPPTNTALG 258
            :.|..|                                    |.|....|...|.:..||:    
  Fly   313 AAGPGPLEPARAAPLVGQSPNHLGTRSSHPQLVHGNHQALQQHQQQSWPPRHYSGSWYPTS---- 373

  Fly   259 LQELGLKLEKRIEE--AVPAG-------------QQLQELGMRLRCDDMGSENDDMSEEDRLMLD 308
            |.|:.:.....|..  |..:|             :.|..:|.:..| .:.:|:..:.:|    ||
  Fly   374 LSEIPISSAPNIASVTAYASGPSLAHSLSPPNDIESLASIGHQRNC-PVATEDIHLKKE----LD 433

  Fly   309 -RSPDELGSNDNDDDLGDSDSDEDLMAETTDGE-RIIYPWMKKIHVAGVANGSYQPGMEPKRQRT 371
             ...||.||.:.::..|.:.:    :..|.|.: |:|   :|:               :.:|.||
  Fly   434 GHQSDETGSGEGENSNGGASN----IGNTEDDQARLI---LKR---------------KLQRNRT 476

  Fly   372 AYTRHQILELEKEF---HYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNV 433
            ::|..||..|||||   ||.....|.|   :|..:.|.|.:|::||.|||.||:::.||.|    
  Fly   477 SFTNDQIDSLEKEFERTHYPDVFARER---LAGKIGLPEARIQVWFSNRRAKWRREEKLRN---- 534

  Fly   434 RKKTVDANGNPTPVAKKPTKRAASKKQQQAQQQQQSQQQQTQQTPVMNECIRSDSLESIGDVS-- 496
            :::|.::.|          ..|.|...........|....:..:.:::......|:.:|..:|  
  Fly   535 QRRTPNSTG----------ASATSSSTSATASLTDSPNSLSACSSLLSGSAGGPSVSTINGLSSP 589

  Fly   497 SSLG---NPPYIPA---APETTSSYPGSQQHLSNNNNNG-----------------SGNNNNNNN 538
            |:|.   |.|.:.|   :.|:.:..|..:...:::|:||                 .|:.|.::.
  Fly   590 STLSTNVNAPTLGAGIDSSESPTPIPHIRPSCTSDNDNGRQSEDCRRVCSPCPLGVGGHQNTHHI 654

  Fly   539 NNNSN-------------LNNNNNNNQMGHTNLHGHLQQQQSD 568
            .:|.:             ||.|:.:....::|:| |.....||
  Fly   655 QSNGHAQGHALVPAISPRLNFNSGSFGAMYSNMH-HTALSMSD 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 24/54 (44%)
eyNP_001014693.1 PAX 98..221 CDD:128645 22/131 (17%)
Homeobox 475..527 CDD:278475 24/54 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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