DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and CG18599

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster


Alignment Length:557 Identity:118/557 - (21%)
Similarity:177/557 - (31%) Gaps:200/557 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 HHYN--GHYSMTASTGHMSGAVGGGAGVGSVGGGGAGGMTGHPHSMHPADMV------------S 87
            :|.|  .|:....:|....|..|||:.|..:||.| ||:..|....|.|...            |
  Fly     8 YHANPLSHFLALHNTQASGGGSGGGSSVAGLGGLG-GGIHAHGQPHHAALAAAAAAAVAVSAGQS 71

  Fly    88 DYMAHHHNPH--------SHSHSHTHSLPHHHSNSAISGHH---QASAGGYSSNYANATPPSHPH 141
            .|...|...|        ...|.|...|..||.:    |||   .....|.::|.::::..|..|
  Fly    72 SYQMEHQQQHHQLQQQQQQQQHHHHQQLHTHHQD----GHHPHPPTPTTGNNNNNSSSSSNSSSH 132

  Fly   142 SHPHAHPHQ---SLGYYVHHAPEFISAGAVHSDPTNG-----------------YGPAANVP--- 183
            :....|..|   :......|| :.|.|.|.||....|                 |..|.|:.   
  Fly   133 NSNSNHREQLAAAAATATSHA-QLIEAAAAHSSLDVGKSFTIAAILGLQSQRKDYNNAINLSLHD 196

  Fly   184 --------------------NTSNGGGGGGSGAVLGGGAVGG------SANGYYGGYGGGYGTAN 222
                                |.:|..||..||......:|..      :.||.| .:||      
  Fly   197 NNNIIGDDNNKCYTSNPNNNNNNNNNGGSNSGNNNSSPSVNNFNCDSVAGNGRY-LHGG------ 254

  Fly   223 GSVGSTHSQGHSPHSQMMDLPLQCSSTEPPTNTALGLQELGLKLEKRIEEAVPAG-QQLQELGMR 286
                  |...| ||                        :.|.........|.|:. |.||:|   
  Fly   255 ------HQHPH-PH------------------------QAGFAAVAAAVGAAPSALQSLQQL--- 285

  Fly   287 LRCDDMGSENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSDSDEDLMAETTDGERIIYPWMKKIH 351
                   .:.....::..|...|  ::|          .|||.:                     
  Fly   286 -------HQQHHAQQQATLSFQR--EKL----------KSDSHK--------------------- 310

  Fly   352 VAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQN 416
                     :..::.||.||.:|..|:..||.||...:|:....|:.:||||.|:|.|:|:||||
  Fly   311 ---------KSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQN 366

  Fly   417 RRMKWKK--------------DNKLPNTKNV-RKKTVDANGNPTPVAKKPTKRAASKKQQQAQQQ 466
            ||:||:|              ..:||.|..: .:.:|.||...:...::....:|:....|.:..
  Fly   367 RRIKWRKHHLELTQQRLALIRQTQLPGTSLLGNQVSVSANAAHSVSTERTNGCSAASPSLQEEDN 431

  Fly   467 QQSQQ--------------QQTQQTPVMNECIRSDSL 489
            :.|:.              |......:.|:.:..|||
  Fly   432 EDSKHSLSLSGALPPLSRAQSESDLSICNDSLDGDSL 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 25/51 (49%)
CG18599NP_650701.1 Homeobox 320..372 CDD:278475 25/51 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858478at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.920

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