DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dfd and Antp

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster


Alignment Length:494 Identity:118/494 - (23%)
Similarity:141/494 - (28%) Gaps:260/494 - (52%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 HHVQSPMSMGNGLDPKFPPLADDYHHYNGH----------YSMTASTGHMSGAV------GGGAG 61
            |:.|:....||...|:|||. |...:|||.          ||...|.....|.|      .|..|
  Fly    44 HYSQNANHQGNMPYPRFPPY-DRMPYYNGQGMDQQQQHQVYSRPDSPSSQVGGVMPQAQTNGQLG 107

  Fly    62 V---------------------------------------------------------GSVGGGG 69
            |                                                         .:|||.|
  Fly   108 VPQQQQQQQQQPSQNQQQQQAQQAPQQLQQQLPQVTQQVTHPQQQQQQPVVYASCKLQAAVGGLG 172

  Fly    70 AGGMTGHPHSMHPADMVSDYMAHHHNPHSHSHSHTHSLPHHHSNSAISGHHQASAGGYSSNYANA 134
            .....|.|      .:|.....||.|...       :||||      .||.||..|     |.:.
  Fly   173 MVPEGGSP------PLVDQMSGHHMNAQM-------TLPHH------MGHPQAQLG-----YTDV 213

  Fly   135 TPPSHPHSHPHAHPHQSLGYYVHH-------APEFISAGAVHSDPTNGYGPAANVPNTSNGGGGG 192
            ..|.....|.:   |.::|.|...       ||   ..|.:|    .|.||    |....|    
  Fly   214 GVPDVTEVHQN---HHNMGMYQQQSGVPPVGAP---PQGMMH----QGQGP----PQMHQG---- 260

  Fly   193 GSGAVLGGGAVGGSANGYYGGYGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQCSSTEPPTNTAL 257
                                                |...|:|.||            .|.:.:.
  Fly   261 ------------------------------------HPGQHTPPSQ------------NPNSQSS 277

  Fly   258 GLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDELGSNDNDDD 322
            |:.                                                 ||           
  Fly   278 GMP-------------------------------------------------SP----------- 282

  Fly   323 LGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHY 387
                                :||||:         ..:....|.||.|..|||:|.||||||||:
  Fly   283 --------------------LYPWMR---------SQFGKCQERKRGRQTYTRYQTLELEKEFHF 318

  Fly   388 NRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 426
            ||||||||||||||.|.|:|||||||||||||||||:||
  Fly   319 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 43/51 (84%)
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 52/323 (16%)
Homeobox 301..354 CDD:395001 44/52 (85%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 1 0.900 - - E2759_KOG0489
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.810

Return to query results.
Submit another query.