Protein Alignment Dfd and bcd

DIOPT Version :9

• Sequence 1: NP_477201.1
• Gene: Dfd / 40832
• FlyBaseID: FBgn0000439
• Length: 586
• Species: Drosophila melanogaster
• Sequence 2: NP_788587.1
• Gene: bcd / 40830
• FlyBaseID: FBgn0000166
• Length: 494
• Species: Drosophila melanogaster
• Alignment Length: 513
• Identity: 94/513 - (18%)
• Similarity: 132/513 - (25%)
• Gaps: 256/513 - (49%)

  Fly    92 HHHNPHSHSHSHTHSLPHHHSNSAISGHHQASAGGYSSNYANATPPSHPHSHPHAHPHQSLGYYV 156
            ||..||:|:|.|.||.||.|                          ||||.| |.||...|
  Fly    12 HHPLPHTHTHPHPHSHPHPH--------------------------SHPHPH-HQHPQLQL---- 45

  Fly   157 HHAPEFISAGAVHSDPTNGYGPAANVPNTSNGGGGGGSGAVLGGGAVGGSANGYYGGYGGGYGTA 221
              .|:|
  Fly    46 --PPQF----------------------------------------------------------- 49

  Fly   222 NGSVGSTHSQGHSPHSQMMDLPLQCSSTEPPTNTALGLQELGLKLEKRIEEAVPAGQQLQELGMR 286
                       .:|...:.|                  :..|......|...:|
  Fly    50 -----------RNPFDLLFD------------------ERTGAINYNYIRPYLP----------- 74

  Fly   287 LRCDDMGSENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSDSDEDLMAETTDGERIIYPWMKKIH 351
                      :.|.:.|....:..||.|                               .|::
  Fly    75 ----------NQMPKPDVFPSEELPDSL-------------------------------VMRR-- 96

  Fly   352 VAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQN 416
                          |:|.||.:|..||.|||:.|...||||..|..:::..|.|...|:||||:|
  Fly    97 --------------PRRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKN 147

  Fly   417 RRMKWK------KDNK---LPNTKNVRK--------KTVDANGNPTPVAKKPTKRAASKKQQQAQ 464
            ||.:.|      ||..   :|.:..:::        :|:...|..||.|..|:
  Fly   148 RRRRHKIQSDQHKDQSYEGMPLSPGMKQSDGDPPSLQTLSLGGGATPNALTPS------------ 200

  Fly   465 QQQQSQQQQTQQTPVMNECIRSDSLESIGDVSSSLGNPPYIPAAPETTSSYPGSQQHLSNNNN-- 527
                    .|..||..:          :.:..|...|..|         :|.|...|...|.:
  Fly   201 --------PTPSTPTAH----------MTEHYSESFNAYY---------NYNGGHNHAQANRHMH 238

  Fly   528 --------NGSGNNNNNNNNNNSNLNNNNNNNQMGHTNLH-GHLQQQQSDLMTNLQLH 576
                    .|.|:.|.|..........:|:..|:.|...| .|..|||.......|.|
  Fly   239 MQYPSGGGPGPGSTNVNGGQFFQQQQVHNHQQQLHHQGNHVPHQMQQQQQQAQQQQYH 296

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dfd	NP_477201.1	Homeobox	370..422	CDD:278475	24/51 (47%)
bcd	NP_788587.1	Homeobox	106..153	CDD:278475	21/46 (46%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439732
Domainoid	1	1.000	45	1.000	Domainoid score	I3555
eggNOG	1	0.900	-	-		E2759_KOG0489
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D858478at2759
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	5	4.840