Protein Alignment Dfd and cdx1

DIOPT Version :9

• Sequence 1: NP_477201.1
• Gene: Dfd / 40832
• FlyBaseID: FBgn0000439
• Length: 586
• Species: Drosophila melanogaster
• Sequence 2: NP_989416.1
• Gene: cdx1 / 395055
• XenbaseID: XB-GENE-485396
• Length: 262
• Species: Xenopus tropicalis
• Alignment Length: 453
• Identity: 102/453 - (22%)
• Similarity: 140/453 - (30%)
• Gaps: 213/453 - (47%)

  Fly    72 GMTGHPHSMHPA-DMVSDYMAHHHNPHSHSHSHTHSLPHHHSNSAISGHHQASAGGYSSNYANAT 135
            |:..:|.:..|| ...||:.::||.|..:|.      |||           ...||..|:|.
 Frog    22 GLNLNPQNYVPAPPQYSDFPSYHHVPGINSD------PHH-----------GQPGGTWSSYT--- 66

  Fly   136 PPSHPHSHPHAHPHQSLGYYVHHAPEFISAGAVHSDPTNGYGPAANVPNTSNGGGGGGSGAVLGG 200
             ||....||                               |||              |.||
 Frog    67 -PSREDWHP-------------------------------YGP--------------GPGA---- 81

  Fly   201 GAVGGSANGYYGGYGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQCSSTEPPTNTALGLQELGLK 265
                .|||                           .:|:...|...:..:||     |...|...
 Frog    82 ----SSAN---------------------------PAQISFSPSDYNPVQPP-----GPGLLPPS 110

  Fly   266 LEKRIEEAVPAGQQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSDSDE 330
            |...:....|:.|:
 Frog   111 LNSSVSPLSPSAQR--------------------------------------------------- 124

  Fly   331 DLMAETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRR 395
                      |.:|.||::..|....|.:.:...:.| .|..||.||.|||||||||:||:|.||
 Frog   125 ----------RNLYEWMRRTGVPTSTNSNGKTRTKDK-YRVVYTDHQRLELEKEFHYSRYITIRR 178

  Fly   396 RIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRKKTVDANGNPTPVAKKPTKRAASKKQ 460
            :.|:|.:|.|:|||:||||||||.|.:|.||                              .|.|
 Frog   179 KAELAASLALTERQVKIWFQNRRAKERKVNK------------------------------KKMQ 213

  Fly   461 QQAQQQQQSQQQQTQQTPVMNECIRSDSLESIGDVSSSLGNPPYIPAAPETTSSYPGSQQHLS 523
            ||:||...:    |...|.:........|.|....:|:|.:|          ||.|..:::||
 Frog   214 QQSQQASTT----TPTPPSVGTTAGMGGLCSSSSSNSNLVSP----------SSMPIKEEYLS 262

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dfd	NP_477201.1	Homeobox	370..422	CDD:278475	35/51 (69%)
cdx1	NP_989416.1	Caudal_act	13..133	CDD:282574	43/277 (16%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	42..120		31/183 (17%)
		Interaction with DNA. /evidence=ECO:0000250|UniProtKB:P47902	152..173		14/20 (70%)
		Homeobox	153..205	CDD:278475	35/51 (69%)
		Interaction with 5-mCpG DNA. /evidence=ECO:0000250|UniProtKB:P47902	191..202		9/10 (90%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	203..262		20/102 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910