DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and cbx5

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_988907.2 Gene:cbx5 / 394502 XenbaseID:XB-GENE-972727 Length:200 Species:Xenopus tropicalis


Alignment Length:119 Identity:26/119 - (21%)
Similarity:48/119 - (40%) Gaps:30/119 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   363 GMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKI---W--FQNRRMKWK 422
            |.:.||...|.:..:    |:|:...:.|.||          :.:.|::.   |  |......|:
 Frog    19 GKKNKRASDASSSSE----EEEYVVEKVLDRR----------VVKGQVEFLLKWKGFSEEHNTWE 69

  Fly   423 KDNKLPNTKNVR------KKTVDANGNPTPVAK-KPTKRAASKKQQQAQQQQQS 469
            .|..|...:.:.      ||..:.:    |.|| :.|||.|.....:|:::::|
 Frog    70 PDRNLDCPELISEFMKKYKKVKETD----PKAKTESTKRKAGSDDIKAKKRRES 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 9/56 (16%)
cbx5NP_988907.2 CD_HP1alpha_Cbx5 37..85 CDD:349298 9/57 (16%)
CSD_HP1alpha_Cbx5 125..182 CDD:349302
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 1 1.000 - - otm47668
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.900

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