DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and NANOGP8

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001342210.1 Gene:NANOGP8 / 388112 HGNCID:23106 Length:305 Species:Homo sapiens


Alignment Length:306 Identity:59/306 - (19%)
Similarity:100/306 - (32%) Gaps:122/306 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 HSQGHSPHSQMMDLPLQCSSTEPPTNTALGLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMG 293
            |::..||....|||.:|.|   |.::|:                  |.|:|           ...
Human    47 HTETVSPLPSSMDLLIQDS---PDSSTS------------------PKGKQ-----------PTS 79

  Fly   294 SENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVANG 358
            :||....:||::.:.:                                                 
Human    80 AENSVAKKEDKVPVKK------------------------------------------------- 95

  Fly   359 SYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMK--- 420
                    ::.||.::..|:..|...|...:||:.::..|:::.|.||.:|:|.||||:|||   
Human    96 --------QKTRTVFSSTQLCVLNDRFQRQKYLSLQQMQELSNILNLSYKQVKTWFQNQRMKSKR 152

  Fly   421 WKKDNKLPNTKNVRKKT-----------------VDANGNPTPVAKKPTKRAASKKQQQAQQQQQ 468
            |:|:|...|:..|.:|.                 |:..|| .|:....|...::...|....|..
Human   153 WQKNNWPKNSNGVTQKASAPTYPSLYSSYHQGCLVNPTGN-LPMWSNQTWNNSTWSNQTQNIQSW 216

  Fly   469 SQQQQTQQTPVMNECIRSDSLESIGDVSSSLGNPPYIPAAPETTSS 514
            |......||    .|.:|        .::...|.|:.....|:..|
Human   217 SNHSWNTQT----WCTQS--------WNNQAWNSPFYNCGEESLQS 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 20/54 (37%)
NANOGP8NP_001342210.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..96 17/137 (12%)
HOX 95..151 CDD:197696 20/112 (18%)
8 X repeats starting with a Trp in each unit 196..240 9/55 (16%)
Sufficient for transactivation activity. /evidence=ECO:0000250 196..240 9/55 (16%)
Sufficient for strong transactivation activity. /evidence=ECO:0000250 241..305 2/10 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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