DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dfd and Dbx

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_647677.2 Gene:Dbx / 38254 FlyBaseID:FBgn0261723 Length:741 Species:Drosophila melanogaster


Alignment Length:647 Identity:143/647 - (22%)
Similarity:196/647 - (30%) Gaps:265/647 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 MTGHPHSMHPADMVSDYMAHH--HNPHS-----------HSHSHTHSLPHHHSNSAISGHHQASA 124
            |..|.|         .|..||  ..|||           |.|||.||..|||       ||..:.
  Fly   189 MQQHSH---------QYQQHHQQQQPHSHPQHQPLAVPGHQHSHPHSHHHHH-------HHPGAG 237

  Fly   125 GGYSSNYANATPPSHPHSH-------PHAHPHQSLGYYVHHAPEFISAGAVHSDPTNGYGPAANV 182
            ..:..:.|..|....||.|       ...||..|.  ....|....|.|:..||..|.:|  |:.
  Fly   238 HAHFPHPAFLTHQLPPHQHHQQQQHVQQQHPGNSC--QPQTASSSSSPGSTISDSDNNHG--AST 298

  Fly   183 PNTSNGGGGGGSG-------------------------------AVLGGGAVGGSANGYYGGYGG 216
            .| .||.|.|.||                               .:||.|..||   |..||:|.
  Fly   299 AN-GNGSGTGNSGQDARPHELANSNPDEDSSASRRLTQDKQQQQQLLGAGGTGG---GGGGGHGH 359

  Fly   217 GYGT---------------ANGSVGSTHSQGHSPHSQMMDLPLQCSSTEPPTNTALGLQELGLKL 266
            |:.|               :..:....|:..| ||  :..|...|.:    ...::|.|...|  
  Fly   360 GHPTPPPPPPPPVIAKPMPSRPTPFLPHTLNH-PH--LHSLLAHCRN----PYMSVGAQVFPL-- 415

  Fly   267 EKRIEEAVPAGQQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSDSDED 331
                    |.||.                                                    
  Fly   416 --------PPGQG---------------------------------------------------- 420

  Fly   332 LMAETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRR 396
                        :||      |....|..:.||   .:|..::..|...|||.|...:|:::..|
  Fly   421 ------------FPW------AHSTRGKPRRGM---MRRAVFSDSQRKGLEKRFQQQKYISKPDR 464

  Fly   397 IEIAHTLVLSERQIKIWFQNRRMKWK-------------KDNKLPNTKNVRKKTVDA-------- 440
            .::|..|.|.:.|:|||||||||||:             :|..|||..|......||        
  Fly   465 KKLAERLGLKDSQVKIWFQNRRMKWRNSKERELLASGGSRDQTLPNKNNPNPDLSDAKCDRPLTP 529

  Fly   441 --------NGNPTP-----VAK-KPTKRAASKKQQQAQQQQQSQQ-----QQTQQTPVMNECIRS 486
                    ||:.||     ||| :|...|.:.|..|:...:.|..     |.:...|::.     
  Fly   530 LSPSLLSPNGSATPPPPGAVAKDEPPTAAVTPKSPQSVSSRSSPSVGYGLQISSPPPLLT----- 589

  Fly   487 DSLESIGDVSSSLGNPPYIPAAPETTSSYPGSQQHLSNNNNNGSGNNNNNNNNNNSNLNNNNNNN 551
             ||: :||.|:| ..|..:|..  |.||...|...::.:......|.........::|.....|:
  Fly   590 -SLK-MGDQSAS-ATPTPLPGT--TVSSAAASPPGVTASEFQAKINAEMQKQLVAADLKFKLENS 649

  Fly   552 --------------QMGHT------------------NLHGHLQQQQSDLMTNLQLHIKQDY 581
                          |:.|:                  .||.|.||||..   ..|.|.:|.:
  Fly   650 IQEAKQRRFEQLQQQLHHSPHFSAMREVELAAAAAAAQLHHHHQQQQQQ---QQQQHAQQQH 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 22/51 (43%)
DbxNP_647677.2 Homeobox 437..490 CDD:278475 22/52 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858478at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.920

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