Protein Alignment Dfd and lms

DIOPT Version :9

• Sequence 1: NP_477201.1
• Gene: Dfd / 40832
• FlyBaseID: FBgn0000439
• Length: 586
• Species: Drosophila melanogaster
• Sequence 2: NP_001286635.1
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Alignment Length: 348
• Identity: 80/348 - (22%)
• Similarity: 112/348 - (32%)
• Gaps: 121/348 - (34%)

  Fly   308 DRSPDELGSNDN----------------DDDLGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVA 356
            |...||.|...|                ||::.|..||.||.::  ||.             |:.
  Fly    33 DSVQDESGRGGNCLGASRASSPATSSCLDDNMDDGKSDIDLASD--DGN-------------GLG 82

  Fly   357 NGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKW 421
            :.      ..||.|||::..||..||.||...:||:..:|..:|..|.|:|.||||||||||.||
  Fly    83 DD------RKKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTKW 141

  Fly   422 KKDNKLPNTKNVRKKTVDAN--------------------------------GNPTPV------- 447
            |           ||.|.|..                                ..|||:
  Fly   142 K-----------RKYTSDVETLASHYYAQLGIGGLARPMVVGDRLWLFSQTPTGPTPIQSIMLNG 195

  Fly   448 --AKKPTKRAASKKQQQAQQQQQSQQQQTQQTPVMNECIRSDSLESIGDVSSSL----GNPP--- 503
              :..|...|.:......:....|........|.:.|..|:..|.....::.:|    ..||
  Fly   196 SGSAAPMASATTATGSPMRPYATSGGMPPLPGPSVMESARNAILARGQPLNFALPFGVAKPPAGG 260

  Fly   504 -----YIPAAPETTSSY-------PGSQQHL-----------SNNNNNGSGNNNNNNNNNNSNLN 545
                 |||......:||       |.::.:|           .:..:||.........:.|:|..
  Fly   261 VPAASYIPRCKPYATSYVDYAASLPTNESYLQMKYATLPPEAESGASNGLAELERVFGDANANFL 325

  Fly   546 NNNNNNQMGHTNLHGH--LQQQQ 566
            ...:....|....:||  |.|.|
  Fly   326 QQRSTPVAGTATAYGHDGLNQAQ 348

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dfd	NP_477201.1	Homeobox	370..422	CDD:278475	27/51 (53%)
lms	NP_001286635.1	Cnd2	33..>106	CDD:303063	25/93 (27%)
		Homeobox	89..142	CDD:278475	27/52 (52%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	53	1.000	Domainoid score	I4196
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D858478at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.920