Protein Alignment Dfd and Lhx4

DIOPT Version :9

• Sequence 1: NP_477201.1
• Gene: Dfd / 40832
• FlyBaseID: FBgn0000439
• Length: 586
• Species: Drosophila melanogaster
• Sequence 2: NP_001101818.2
• Gene: Lhx4 / 360858
• RGDID: 1308044
• Length: 390
• Species: Rattus norvegicus
• Alignment Length: 221
• Identity: 49/221 - (22%)
• Similarity: 88/221 - (39%)
• Gaps: 46/221 - (20%)

  Fly   329 DEDLMAETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTR 393
            ||..:.|  ||..:    .|:.:.....|...:.|  .||.||..|..|:..|:..:..:....|
  Rat   128 DEFYLME--DGRLV----CKEDYETAKQNDDSEAG--AKRPRTTITAKQLETLKNAYKNSPKPAR 184

  Fly   394 RRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRKKTVDANGNPTPVAKKPTKRA--A 456
            ..|.:::....|..|.:::||||||.|.|:..|            ||..:......|..||:  .
  Rat   185 HVREQLSSETGLDMRVVQVWFQNRRAKEKRLKK------------DAGRHRWGQFYKSVKRSRGG 237

  Fly   457 SKKQQQAQQQQ---QSQQQQTQQTPVMNECIRSDSL-ESIGDVSSSL------------------ 499
            ||:::::..:.   ...:...::..:::|...::.: .::|||:...
  Rat   238 SKQEKESSAEDCGVSDSELSFREDQILSELGHTNRIYGNVGDVTGGQLMNGSFSMDGTGQSYQDL 302

  Fly   500 --GNPPYIPAAPETTSSYPGSQQHLS 523
              |:|..||.:|.:.||.|.....||
  Rat   303 RDGSPYGIPQSPSSISSLPSHAPLLS 328

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dfd	NP_477201.1	Homeobox	370..422	CDD:278475	16/51 (31%)
Lhx4	NP_001101818.2	LIM1_Lhx4	30..81	CDD:188852
		LIM2_Lhx3_Lhx4	89..144	CDD:188762	6/21 (29%)
		Homeobox	160..214	CDD:395001	16/53 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910