DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dfd and B-H2

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster


Alignment Length:707 Identity:127/707 - (17%)
Similarity:200/707 - (28%) Gaps:314/707 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 HHVQSPMSMGNGLD-PKFPPLADDYHHYNGHYSMTAST-------------GHMSGAVGGGAGVG 63
            ||   |.::|.|:. |..|.:.      :...:.||:|             |..:.:....|...
  Fly    25 HH---PAAVGGGMPRPASPAVG------SNTTTATATTATRSRFMITDILAGAAAASAAAAAAAA 80

  Fly    64 SVGGGGAGGMTGHPHSMHPADMVSDYMAHHHNPHSHSHSHTHSLPHHHSNSAISGHHQASA---- 124
            ::....:||..|.|..   ::.....:|.||:.|.....|     |||........||.:|    
  Fly    81 ALAAASSGGGRGSPTD---SEREQSLVAQHHHHHQQQQQH-----HHHQQQQQQQQHQQAALQQY 137

  Fly   125 ------------------------------GGYSSNYANAT---------PPSH----------- 139
                                          |  ::.||:..         ||:|           
  Fly   138 IVQQQQLLRFEREREREREREHYRERHSPPG--NNPYAHHPMPPHLLAHFPPAHYAVLQQQQQQQ 200

  Fly   140 -PHSHPHAH----------------------PHQSLGY-----------YVHH--------APEF 162
             ...|||.|                      |.|.|.:           ::||        :|..
  Fly   201 QQQQHPHPHHLQLERERLEALHRHGHGLTGDPAQHLSHLSHLSHQQHHPHLHHPMHDERSRSPLM 265

  Fly   163 ISA----GAVHSDPTNGYGPAANVPNTSNGGGGGGSGAVLGGGAVGGSANGYYGG---YGGGYGT 220
            :..    |..:::..|....|:|..|.:|......|..:.|..:...:.||...|   .||...:
  Fly   266 LQQLGGNGGNNNNNNNNSSSASNNNNNNNNSASANSNIISGNSSSSNNNNGSGNGNMLLGGPGSS 330

  Fly   221 ANGSVGSTHSQGHSPHSQMMDLPLQCSSTEPPTNTALGLQELGLKLEKRIEEAVPAGQQLQELGM 285
            .:|...||.....|                                                   
  Fly   331 ISGDQASTIDDSDS--------------------------------------------------- 344

  Fly   286 RLRCDDMGSENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSDSDEDLMAETTDGERIIYPWMKKI 350
                ||.|.::||  .:|.:       :.||:.|    |||.|                      
  Fly   345 ----DDCGGKDDD--GDDSM-------KNGSSAN----GDSSS---------------------- 370

  Fly   351 HVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQ 415
            |:      |.....:.::.|||:|.||:..|||.|...:||:.:.|:|:|:.|.||:.|:|.|:|
  Fly   371 HL------SLSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQ 429

  Fly   416 NRRMKWKKDN------------------------------------------------------- 425
            |||.|||:..                                                       
  Fly   430 NRRTKWKRQTAVGLELLAEAGNYAAFQRLYGGATPYLSAWPYAAAAAAQSPHGATPSAIDIYYRQ 494

  Fly   426 ----------KLPNTKNVRKKTVDANGN------PTPVAKKPT-----KRAASKKQQQAQQQQQS 469
                      .||.:..:.:.::....:      |.|....|.     ..||:.......||||.
  Fly   495 AAAAAAMQKPSLPASYRMYQSSIPPGMSLPGMPAPPPPGAAPMLSGYYAAAAAAAASAGAQQQQQ 559

  Fly   470 QQQQTQQTPVMNECIRSDSLESIGDVSSSLGNPPYIPAAPETTSSYPGSQQHLSNNN 526
            |.....::|..::...|   |:..:.:||......|..:|...   |||..|....|
  Fly   560 QPPAASRSPATSQSANS---EADCERTSSSSRQRLITPSPPLN---PGSPPHRERIN 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 26/51 (51%)
B-H2NP_523386.1 Homeobox 384..436 CDD:278475 26/51 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858478at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.