DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and HOXD8

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_062458.1 Gene:HOXD8 / 3234 HGNCID:5139 Length:290 Species:Homo sapiens


Alignment Length:370 Identity:98/370 - (26%)
Similarity:138/370 - (37%) Gaps:128/370 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 HSNSAISGHHQASAGGYSSNYANATPPSHPHSHP--HAHPHQSLGYYVHHAPEFISAGAVHSDPT 173
            |....:.|.|.|:|..... |.|:. ...||:.|  |||||.|                      
Human    35 HFAPEVGGRHAAAAAALQL-YGNSA-AGFPHAPPQAHAHPHPS---------------------- 75

  Fly   174 NGYGPAANVPNTSNGGGGGGSGAVLGGGAVGGSANGYYGGYGGGYGTANGSVGSTHSQG--HSPH 236
                     |..|..|.||..|.        |....:.||         ||..:.:...  ..||
Human    76 ---------PPPSGTGCGGREGR--------GQEYFHPGG---------GSPAAAYQAAPPPPPH 114

  Fly   237 SQMMDLPLQCSST----EPPTNTALGLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMGSEND 297
            ......|..|...    ||.  ...|...|.       .:.:...||..||   ::..|..|.:.
Human   115 PPPPPPPPPCGGIACHGEPA--KFYGYDNLQ-------RQPIFTTQQEAEL---VQYPDCKSSSG 167

  Fly   298 DMSEEDRLMLDRSPDELGSNDNDDDLGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVANGSYQP 362
            ::.|:        ||.|..:.:...:                    :|||:             |
Human   168 NIGED--------PDHLNQSSSPSQM--------------------FPWMR-------------P 191

  Fly   363 GMEP--KRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDN 425
            ...|  :|.|..|:|.|.|||||||.:|.||||:||||::|.|.|:|||:|||||||||||||:|
Human   192 QAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKEN 256

  Fly   426 KLPNTKNVRKKTVDANGNPTPVAKKPTKRAASKKQQQAQQQQQSQ 470
                           |.:..||:::..|...:||:.|..::.:::
Human   257 ---------------NKDKFPVSRQEVKDGETKKEAQELEEDRAE 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 36/51 (71%)
HOXD8NP_062458.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 60..127 24/114 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 161..200 11/79 (14%)
Homeobox 201..253 CDD:278475 36/51 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 255..290 8/47 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 131 1.000 Inparanoid score I4642
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.860

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