DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and HOXD3

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_008829.3 Gene:HOXD3 / 3232 HGNCID:5137 Length:432 Species:Homo sapiens


Alignment Length:468 Identity:115/468 - (24%)
Similarity:159/468 - (33%) Gaps:167/468 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 GGYSSNYANATPPSHPHSHPHAHPHQSLGYYVHHAPEFISAGAVHSDPTNGYGPAANVPNTSNGG 189
            |||  .|:..|              .:.||...|.| :....|..|..|:..|.|.::.:::...
Human    30 GGY--GYSKTT--------------DTYGYSTPHQP-YPPPAAASSLDTDYPGSACSIQSSAPLR 77

  Fly   190 GGGGSGAVLGGGAV-GGSANGYYGGYGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQCSSTEPPT 253
            .....||.|.|..: .|:.|    ..|||.|:....:.| ..|...|......||     ...||
Human    78 APAHKGAELNGSCMRPGTGN----SQGGGGGSQPPGLNS-EQQPPQPPPPPPTLP-----PSSPT 132

  Fly   254 NTALGLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDELGSND 318
            |...|               |||.:            ..|..|                      
Human   133 NPGGG---------------VPAKK------------PKGGPN---------------------- 148

  Fly   319 NDDDLGDSDSDEDLMAETTDGERIIYPWMKKIH----------VAGVA-NGSYQPGMEPKRQRTA 372
                  .|.|...:..:       |:||||:..          .||.: .....||...||.|||
Human   149 ------ASSSSATISKQ-------IFPWMKESRQNSKQKNSCATAGESCEDKSPPGPASKRVRTA 200

  Fly   373 YTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRKKT 437
            ||..|::|||||||:||||.|.||:|:|:.|.|:||||||||||||||:|||.|       .|..
Human   201 YTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-------AKGI 258

  Fly   438 VDANGNPTPVAKKPTKRAASKKQQQAQ------------------QQQQSQQQQTQQTPVMNECI 484
            :.:..:.:|....|...||.......|                  :.|.:.......|..::.|:
Human   259 LHSPASQSPERSPPLGGAAGHVAYSGQLPPVPGLAYDAPSPPAFAKSQPNMYGLAAYTAPLSSCL 323

  Fly   485 RSDSLESI-------------GDVSSSL-GNPPYI---------PAA-----------PETTS-- 513
            ......:.             |..|::| |:|.|:         ||:           |.:.|  
Human   324 PQQKRYAAPEFEPHPMASNGGGFASANLQGSPVYVGGNFVESMAPASGPVFNLGHLSHPSSASVD 388

  Fly   514 -----SYPGSQQH 521
                 ..||:..|
Human   389 YSCAAQIPGNHHH 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 38/51 (75%)
HOXD3NP_008829.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..62 5/19 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..197 36/200 (18%)
Antp-type hexapeptide 160..165 3/4 (75%)
Homeobox 198..250 CDD:306543 38/51 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 253..280 6/33 (18%)
DUF4074 369..430 CDD:315871 6/33 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..432 1/2 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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