DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and HOXD3

DIOPT Version :10

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_008829.3 Gene:HOXD3 / 3232 HGNCID:5137 Length:432 Species:Homo sapiens


Alignment Length:468 Identity:115/468 - (24%)
Similarity:159/468 - (33%) Gaps:167/468 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 GGYSSNYANATPPSHPHSHPHAHPHQSLGYYVHHAPEFISAGAVHSDPTNGYGPAANVPNTSNGG 189
            |||  .|:..|              .:.||...|.| :....|..|..|:..|.|.::.:::...
Human    30 GGY--GYSKTT--------------DTYGYSTPHQP-YPPPAAASSLDTDYPGSACSIQSSAPLR 77

  Fly   190 GGGGSGAVLGGGAV-GGSANGYYGGYGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQCSSTEPPT 253
            .....||.|.|..: .|:.|    ..|||.|:....:.| ..|...|......||     ...||
Human    78 APAHKGAELNGSCMRPGTGN----SQGGGGGSQPPGLNS-EQQPPQPPPPPPTLP-----PSSPT 132

  Fly   254 NTALGLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDELGSND 318
            |...|               |||.:            ..|..|                      
Human   133 NPGGG---------------VPAKK------------PKGGPN---------------------- 148

  Fly   319 NDDDLGDSDSDEDLMAETTDGERIIYPWMKKIH----------VAGVA-NGSYQPGMEPKRQRTA 372
                  .|.|...:..:       |:||||:..          .||.: .....||...||.|||
Human   149 ------ASSSSATISKQ-------IFPWMKESRQNSKQKNSCATAGESCEDKSPPGPASKRVRTA 200

  Fly   373 YTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRKKT 437
            ||..|::|||||||:||||.|.||:|:|:.|.|:||||||||||||||:|||.|       .|..
Human   201 YTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-------AKGI 258

  Fly   438 VDANGNPTPVAKKPTKRAASKKQQQAQ------------------QQQQSQQQQTQQTPVMNECI 484
            :.:..:.:|....|...||.......|                  :.|.:.......|..::.|:
Human   259 LHSPASQSPERSPPLGGAAGHVAYSGQLPPVPGLAYDAPSPPAFAKSQPNMYGLAAYTAPLSSCL 323

  Fly   485 RSDSLESI-------------GDVSSSL-GNPPYI---------PAA-----------PETTS-- 513
            ......:.             |..|::| |:|.|:         ||:           |.:.|  
Human   324 PQQKRYAAPEFEPHPMASNGGGFASANLQGSPVYVGGNFVESMAPASGPVFNLGHLSHPSSASVD 388

  Fly   514 -----SYPGSQQH 521
                 ..||:..|
Human   389 YSCAAQIPGNHHH 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeodomain 367..423 CDD:459649 40/55 (73%)
HOXD3NP_008829.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..62 5/19 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..197 36/200 (18%)
Antp-type hexapeptide 160..165 3/4 (75%)
Homeodomain 195..251 CDD:459649 40/55 (73%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 253..280 6/33 (18%)
DUF4074 369..430 CDD:463833 6/33 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..432 1/2 (50%)

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