DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and HOXC4

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_055435.2 Gene:HOXC4 / 3221 HGNCID:5126 Length:264 Species:Homo sapiens


Alignment Length:470 Identity:127/470 - (27%)
Similarity:154/470 - (32%) Gaps:224/470 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSFLMGYPHAPHHVQSPMSMGNGLDPKFPPLADDYHHYNGHYSMTASTGHMSGAVGGGAGVGSV 65
            |||:||.              .|.:||||||..:        ||.                    
Human     3 MSSYLMD--------------SNYIDPKFPPCEE--------YSQ-------------------- 25

  Fly    66 GGGGAGGMTGHPHSMHPADMVSDYMAHHHNPHSHSHSHTHSLPHHHSNSAISGHHQASAGGYSSN 130
                                 :.|:. .|:|..:..:......|||.                  
Human    26 ---------------------NSYIP-EHSPEYYGRTRESGFQHHHQ------------------ 50

  Fly   131 YANATPPSHPHSHPHAHPHQSLGYYVHHAPEFISAGAVHSDPTNGYGPAANVPNTSNGGGGGGSG 195
              ...||..|.                  |.:               |......||..|.|...|
Human    51 --ELYPPPPPR------------------PSY---------------PERQYSCTSLQGPGNSRG 80

  Fly   196 AVLGGGAVGGSANGYYGGYGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQCSSTEPPTNTALGLQ 260
                                      :|...:.|.......|.....||..:|..|         
Human    81 --------------------------HGPAQAGHHHPEKSQSLCEPAPLSGASASP--------- 110

  Fly   261 ELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDELGSNDNDDDLGD 325
                      ..|.||..|                             .:||...|         
Human   111 ----------SPAPPACSQ-----------------------------PAPDHPSS--------- 127

  Fly   326 SDSDEDLMAETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRY 390
                      ....:.|:|||||||||:.| |.:|..| ||||.||||||.|:||||||||||||
Human   128 ----------AASKQPIVYPWMKKIHVSTV-NPNYNGG-EPKRSRTAYTRQQVLELEKEFHYNRY 180

  Fly   391 LTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRK--------KTVDANGNPTPV 447
            |||||||||||:|.||||||||||||||||||||::||||| ||.        .|:.|   .||.
Human   181 LTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLPNTK-VRSAPPAGAAPSTLSA---ATPG 241

  Fly   448 AKKPTKRAASKKQQQ 462
            ..:...::|:..:||
Human   242 TSEDHSQSATPPEQQ 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 47/51 (92%)
HOXC4NP_055435.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..130 33/306 (11%)
Antp-type hexapeptide 135..140 3/4 (75%)
Homeobox 159..213 CDD:395001 48/53 (91%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..264 15/47 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 112 1.000 Domainoid score I6194
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 1 1.000 - - otm40488
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45771
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4536
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
87.940

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