DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and HOXA13

DIOPT Version :10

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_000513.2 Gene:HOXA13 / 3209 HGNCID:5102 Length:388 Species:Homo sapiens


Alignment Length:436 Identity:100/436 - (22%)
Similarity:153/436 - (35%) Gaps:138/436 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 HMSGAVGGGAGVGSVGGGGAGGMTGHPH-------------------SMHPADMVSDYMAHHHNP 96
            :|.||....|...:....|||| .|.||                   :...|:...:.|||....
Human    34 NMEGAAAAAAAAAAAAAAGAGG-GGFPHPAAAAAGGNFSVAAAAAAAAAAAANQCRNLMAHPAPL 97

  Fly    97 HSHSHSHTHSLPHHHSNSAISGHHQASAGGYSSNYANAT---PPSHP------------------ 140
            ...:.|...|.|.....||.:....|:|...::..|:::   .|:.|                  
Human    98 APGAASAYSSAPGEAPPSAAAAAAAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQCSPCSAAAQS 162

  Fly   141 HSHPHAHPHQSLGYYVHHAPEFISAGAVHSDPTNGYGPAANV---PNTSNGGGGGGSGAVLGGGA 202
            .|.|.|.|:   ||:                 .:||.|.|.:   ||.........|.|.....|
Human   163 SSGPAALPY---GYF-----------------GSGYYPCARMGPHPNAIKSCAQPASAAAAAAFA 207

  Fly   203 ------VGGSANGY------YGGYGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQCSSTEPPTNT 255
                  .|.:|..:      :..|..||     :.|..|.  |.|....:|:|:......|..:.
Human   208 DKYMDTAGPAAEEFSSRAKEFAFYHQGY-----AAGPYHH--HQPMPGYLDMPVVPGLGGPGESR 265

  Fly   256 ALGLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDELGSNDND 320
            .   :.|||.:|.....|:|.|...|     :.|.      .:.::...|.....|         
Human   266 H---EPLGLPMESYQPWALPNGWNGQ-----MYCP------KEQAQPPHLWKSTLP--------- 307

  Fly   321 DDLGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEF 385
                      |:::..:|.                  .||:.|   :::|..||:.|:.|||:|:
Human   308 ----------DVVSHPSDA------------------SSYRRG---RKKRVPYTKVQLKELEREY 341

  Fly   386 HYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK-DNKLPNT 430
            ..|:::|:.:|..|:.|..|||||:.|||||||:|.|| .|||..|
Human   342 ATNKFITKDKRRRISATTNLSERQVTIWFQNRRVKEKKVINKLKTT 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeodomain 367..423 CDD:459649 26/55 (47%)
HOXA13NP_000513.2 HoxA13_N 85..224 CDD:463521 30/158 (19%)
Homeodomain 323..379 CDD:459649 26/55 (47%)

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