DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dfd and dlx4a

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_571375.1 Gene:dlx4a / 30561 ZFINID:ZDB-GENE-980526-73 Length:250 Species:Danio rerio


Alignment Length:382 Identity:69/382 - (18%)
Similarity:106/382 - (27%) Gaps:177/382 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 MTGHPHSMHPAD-MVSDYMAHHHNPHSHSHSHTHSLPHHHSNSAISGHHQASAGGYSSNYANATP 136
            ||....|:..:| ..|.::...|...||..   ||....|::..:.|.||   |.:|...|..:|
Zfish     3 MTSLSESLEASDPSKSAFLEFSHGYQSHQQ---HSPGVSHAHYPVHGLHQ---GAHSQYDAAFSP 61

  Fly   137 PSHPHSHPHAHPHQSLGYYVHHAPEFISAGAVHSDPTNGYGPAANVPNTSNGGGGGGSGAVLGGG 201
            .:..:|.|.|:.:.:    .||.|                                         
Zfish    62 GAASYSRPLAYHYST----AHHHP----------------------------------------- 81

  Fly   202 AVGGSANGYYGGYGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQCSSTEPPTNTALGLQELGLKL 266
                          |.|                       ||.|       .|:|:|..      
Zfish    82 --------------GAY-----------------------LPYQ-------HNSAVGYS------ 96

  Fly   267 EKRIEEAVPAGQQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSDSDED 331
                                 |.:|..||.....|...:.|                        
Zfish    97 ---------------------RVEDADSEKQSSIESGEIRL------------------------ 116

  Fly   332 LMAETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRR 396
                                     ||.   |.:.::.||.|:..|:..|.:.|...:||....|
Zfish   117 -------------------------NGK---GKKIRKPRTIYSSLQLQALNQRFQQTQYLALPER 153

  Fly   397 IEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNT--KNVRKKTVDANGNPTPVAKKP 451
            .::|..|.|::.|:||||||:|.|:||..|..::  :....:...|:|.|......|
Zfish   154 ADLAAKLGLTQTQVKIWFQNKRSKYKKIMKHGSSGPEGEHLQAASASGAPCSPGMPP 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 21/51 (41%)
dlx4aNP_571375.1 COG5576 98..206 CDD:227863 35/159 (22%)
Homeobox 126..179 CDD:278475 21/52 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 182..202 2/19 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.