DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dfd and emx3

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_571354.1 Gene:emx3 / 30536 ZFINID:ZDB-GENE-990415-53 Length:233 Species:Danio rerio


Alignment Length:152 Identity:44/152 - (28%)
Similarity:73/152 - (48%) Gaps:34/152 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 YPWMKKIHVAG-------------VANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRR 395
            |||:.:....|             :.:|.:  ..:|||.|||::..|:|.||:.|..|.|:....
Zfish   102 YPWVLRNRYLGHRFQGDDSSPENLLLHGPF--SRKPKRIRTAFSPSQLLRLERAFEKNHYVVGAE 164

  Fly   396 RIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRKKTVDANGNPTPVAKKPTKRAASKKQ 460
            |.::|:.|.|:|.|:|:||||||           ||:.|:|..:.:.:|      ..||..|  |
Zfish   165 RKQLANGLCLTETQVKVWFQNRR-----------TKHKRQKLEEESPDP------QQKRKGS--Q 210

  Fly   461 QQAQQQQQSQQQQTQQTPVMNE 482
            ..::.:..:||...:...|::|
Zfish   211 HVSRWRVATQQGSPEDIDVISE 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 23/51 (45%)
emx3NP_571354.1 Homeobox 139..191 CDD:278475 25/62 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.