DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and msx3

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_571347.2 Gene:msx3 / 30526 ZFINID:ZDB-GENE-980526-306 Length:273 Species:Danio rerio


Alignment Length:162 Identity:50/162 - (30%)
Similarity:74/162 - (45%) Gaps:25/162 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   302 EDRLML-------DRS-PDELGSNDNDDDLGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVANG 358
            ::||.|       ||. |.|..||.:|...||.   |:|..:...|      |.:..........
Zfish    82 DERLKLSPMALYADRKIPVESVSNLSDCKRGDM---EELSDKGQSG------WFQTTSYTSPPRH 137

  Fly   359 SYQP------GMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNR 417
            |..|      ....::.||.:|..|:|.||::|...:||:...|.|.:::|.|:|.|:|||||||
Zfish   138 SSPPPCTLRKHKNNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSNSLNLTETQVKIWFQNR 202

  Fly   418 RMKWKK--DNKLPNTKNVRKKTVDANGNPTPV 447
            |.|.|:  :.:|...|...|..:.|...|.|:
Zfish   203 RAKAKRLQEAELEKLKLATKPLLPAFAFPFPL 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 25/51 (49%)
msx3NP_571347.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..159 8/53 (15%)
Homeobox 154..207 CDD:278475 25/52 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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