DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and hoxa13b

DIOPT Version :10

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_571269.2 Gene:hoxa13b / 30438 ZFINID:ZDB-GENE-980526-365 Length:289 Species:Danio rerio


Alignment Length:82 Identity:37/82 - (45%)
Similarity:53/82 - (64%) Gaps:9/82 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   346 WMKKIH--VAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLT--RRRRIEIAHTLVLS 406
            |...|.  |:|....|.:.|   :::|..||:.|:.|||:|:..|:::|  :||||. ||| .|:
Zfish   204 WKSSIQDTVSGTDGASVRRG---RKKRVPYTKVQLKELEREYATNKFITKDKRRRIS-AHT-NLT 263

  Fly   407 ERQIKIWFQNRRMKWKK 423
            |||:.|||||||:|.||
Zfish   264 ERQVTIWFQNRRVKEKK 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeodomain 367..423 CDD:459649 29/57 (51%)
hoxa13bNP_571269.2 HoxA13_N 27..131 CDD:463521
Homeodomain 224..280 CDD:459649 29/57 (51%)
Blue background indicates that the domain is not in the aligned region.

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