DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and hoxa10b

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_571230.2 Gene:hoxa10b / 30391 ZFINID:ZDB-GENE-990415-97 Length:347 Species:Danio rerio


Alignment Length:122 Identity:45/122 - (36%)
Similarity:67/122 - (54%) Gaps:14/122 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 RSPDELGSNDNDDDLGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAY 373
            |:.:..||..........||.|..:..|..|:.           ...:..::......:::|..|
Zfish   227 RNKELRGSTGTASSPEPPDSPEKAVTVTKAGDS-----------KSESTANWLTAKSGRKKRCPY 280

  Fly   374 TRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK---DNKL 427
            |:||.|||||||.:|.||||.||:||:.::.|::||:||||||||||.||   :|::
Zfish   281 TKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMSRENRI 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 34/51 (67%)
hoxa10bNP_571230.2 Homeobox 276..329 CDD:306543 34/52 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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