DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Dfd and hoxc5a

DIOPT Version :9

Sequence 1:	NP_477201.1	Gene:	Dfd / 40832	FlyBaseID:	FBgn0000439	Length:	586	Species:	Drosophila melanogaster
Sequence 2:	NP_571219.2	Gene:	hoxc5a / 30379	ZFINID:	ZDB-GENE-980526-533	Length:	233	Species:	Danio rerio

Alignment Length:	219	Identity:	88/219 - (40%)
Similarity:	114/219 - (52%)	Gaps:	41/219 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly   229 HSQGHSPHSQMMDLPLQCS-STEPPTNTALGLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDM 292
            ||:.|..:.....|.|..| |::.||| :|..:.:......|...||...|....||.|......
Zfish    30 HSEFHESNYAYEGLDLGGSFSSQIPTN-SLRREAINTTDRARSSAAVQRTQSCSALGSRSFVSTH 93

  Fly   293 G---SENDDMSE--EDRLMLDRSPDELGSNDNDDDLGDSDSDEDLMAETT--------------D 338
            |   ..:..:|:  |..:.:...|.           |.|.:| |:..|||              .
Zfish    94 GYNPLSHGLLSQKAEGNMEVMEKPS-----------GKSRTD-DIKMETTSAIKQQTNSTQRQNQ 146

  Fly   339 GERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTL 403
            .:..|||||.|:|::..::|        ||.||:|||:|.||||||||:|||||||||||||:.|
Zfish   147 SQPQIYPWMTKLHMSHESDG--------KRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNL 203

  Fly   404 VLSERQIKIWFQNRRMKWKKDNKL 427
            .|:||||||||||||||||||:||
Zfish   204 CLNERQIKIWFQNRRMKWKKDSKL 227

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Dfd	NP_477201.1	Homeobox	370..422	CDD:278475	43/51 (84%)
hoxc5a	NP_571219.2	Homeobox	169..222	CDD:278475	43/52 (83%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.910