Protein Alignment Dfd and Hoxb3

DIOPT Version :9

• Sequence 1: NP_477201.1
• Gene: Dfd / 40832
• FlyBaseID: FBgn0000439
• Length: 586
• Species: Drosophila melanogaster
• Sequence 2: NP_001100512.1
• Gene: Hoxb3 / 303488
• RGDID: 1310780
• Length: 429
• Species: Rattus norvegicus
• Alignment Length: 546
• Identity: 128/546 - (23%)
• Similarity: 162/546 - (29%)
• Gaps: 284/546 - (52%)

  Fly   110 HHSNSAISGHHQASAGGYSS-----NYANATPPSHPHSHPHAHPH------------QSLGYYVH 157
            ::.|:|     .|..|||||     .:....||..|.   .|..|            ||||....
  Rat     6 YYDNTA-----AALFGGYSSYPGSNGFGYDGPPQPPF---QAATHLEGDYQRSACSLQSLGNAAP 62

  Fly   158 H---------------APEFISA-----------GAVHSDPTNGYGPAA---------------- 180
            |               |||.:.|           .:..|:..||.||:.
  Rat    63 HAKSKELNGSCMRPGLAPEPLPAPPGSPPPSAAPTSTTSNSNNGGGPSKSGPPKCGASSNSTLTK 127

  Fly   181 -----------------NVPNTSNGGGGGGSGAVLGGGAVGGSANGYYGGYGGGYGTANGSVGST 228
                             :.|.|:.|.||||     |||..|||::| .||.|||.|
  Rat   128 QIFPWMKESRQTSKLKNSSPGTAEGCGGGG-----GGGGGGGSSSG-GGGSGGGGG--------- 177

  Fly   229 HSQGHSPHSQMMDLPLQCSSTEPPTNTALGLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMG 293
                                                                             
  Rat   178 ----------------------------------------------------------------- 177

  Fly   294 SENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVANG 358
                          |:||
  Rat   178 --------------DKSP----------------------------------------------- 181

  Fly   359 SYQPG-MEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWK 422
               || ...||.|||||..|::|||||||:||||.|.||:|:|:.|.||||||||||||||||:|
  Rat   182 ---PGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYK 243

  Fly   423 KDNKLPNTKNVRKKTVDANGNPTPVAK-----------------------KPTKRAASKKQQQAQ 464
            ||.|       .|....::|.|:|...                       .|:..|.||..|.|.
  Rat   244 KDQK-------AKGLASSSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYDSPSPPAFSKGHQNAY 301

  Fly   465 QQQQSQQ---------QQTQQTPVMNECIRSDSLESIG---DVSSSLGNPPYI-------PAAPE 510
            ....:.|         |:...||...  ..|..|::.|   ...:..|:|.|:       |..|.
  Rat   302 ALPSNYQPPLKGCGAPQKYPPTPAPE--YESHVLQANGGAYGTPTMQGSPVYVGGGGYADPLPPP 364

  Fly   511 TTSSYPGSQQHLSNNNNNGSGNNNNN 536
            ...|..| ..|||   ::.|||.:.|
  Rat   365 AGPSLYG-LNHLS---HHPSGNLDYN 386

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dfd	NP_477201.1	Homeobox	370..422	CDD:278475	39/51 (76%)
Hoxb3	NP_001100512.1	Homeobox	191..244	CDD:395001	39/52 (75%)
		DUF4074	365..427	CDD:404218	9/26 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810